RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CTXN2P0C2S0 81 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SLC2A5P22732 501 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 FSHRP23945 695 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ACTR1BP42025 376 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 HSD17B7P56937 341 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 KIAA1024LP59773 190 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ARF5P84085 180 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 BEX3Q00994 111 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 KIR2DS5Q14953 304 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SF1Q15637 639 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 PRSS36Q5K4E3 855 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 APOOLQ6UXV4 268 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 OR13D1Q8NGV5 346 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 OR6N2Q8NGY6 317 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 OR51A7Q8NH64 312 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 MFSD8Q8NHS3 518 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 CDS1Q92903 461 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 CNTNAP3Q9BZ76 1288 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 TMLHEQ9NVH6 421 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 CBY1Q9Y3M2 126 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 C2orf92A0A1B0GVN3 265 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 GLTPD2A6NH11 291 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 CD8B2A6NJW9 211 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 M0R3H8 397 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 PLGP00747 810 aaPredicted RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 APODP05090 189 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 CD8BP10966 210 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ITPKBP27987 946 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 MECP2P51608 486 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 SUMO3P55854 103 aaPredicted RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 SLC26A5P58743 744 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 IL13RA1P78552 427 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 FABP5Q01469 135 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ALKBH1Q13686 389 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 SYPL1Q16563 259 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ARHGAP40Q5TG30 622 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 MRM1Q6IN84 353 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 PRSS54Q6PEW0 395 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 GKN2Q86XP6 184 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ZNF615Q8N8J6 731 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ACOT4Q8N9L9 421 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 RCBTB1Q8NDN9 531 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 NLGN4YQ8NFZ3 816 aaPredicted RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 SLC25A43Q8WUT9 341 aaPredicted RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 TMEM106AQ96A25 262 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 TOE1Q96GM8 510 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 FERD3LQ96RJ6 166 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 REPIN1Q9BWE0 567 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 ATG5Q9H1Y0 275 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 NIT2Q9NQR4 276 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 PISDQ9UG56 409 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 PLSCR5A0PG75 271 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 HCRTO43612 131 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ABLIM3O94929 683 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 CD37P11049 281 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 DCTDP32321 178 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 RPL35P42766 123 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 SGSHP51688 502 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 TAS2R30P59541 319 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 HERV-K104P61576 105 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 MFGE8Q08431 387 aaPredicted RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 CHRFAM7AQ494W8 412 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ZNF627Q7L945 461 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 GDF7Q7Z4P5 450 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 CARFQ8N187 725 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 OR5H2Q8NGV7 314 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 TMEM40Q8WWA1 233 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 DAZLQ92904 295 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 COL26A1Q96A83 441 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 FAM3DQ96BQ1 224 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 RBMXL1Q96E39 390 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 SEH1LQ96EE3 360 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ZFYVE21Q9BQ24 234 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 PAPOLGQ9BWT3 736 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 WDR76Q9H967 626 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 EXOSC3Q9NQT5 275 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 GAR1Q9NY12 217 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 IL20RAQ9UHF4 553 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ADAM18Q9Y3Q7 739 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 DUXBA0A1W2PPF3 345 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 MFSD2BA6NFX1 497 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 E5RGE8 158 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 H3BNC9 293 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 M0QZK8 103 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 GGCTO75223 188 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 PTP4A3O75365 173 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 HLA-AP01891 365 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 C8AP07357 584 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 ADRA2CP18825 462 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 SHC1P29353 583 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 CSNK1EP49674 416 aaKnown RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 RABGGTBP53611 331 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 DVL1P1P54792 670 aaPredicted RBP3.74□□□□□ -1.81
SOX6-217ENST00000533870 CRMP1Q14194 572 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 TFAP2EQ6VUC0 442 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 Q7L0L9 218 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 NLRC3Q7RTR2 1065 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 SSX6Q7RTT6 188 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 KANSL1Q7Z3B3 1105 aa3.74□□□□□ -1.81
SOX6-217ENST00000533870 LYG2Q86SG7 212 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms