RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 PIMREGQ9BSJ6 248 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 AMBRA1Q9C0C7 1298 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 C20orf27Q9GZN8 174 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 SHARPINQ9H0F6 387 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 PIF1Q9H611 641 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 MOV10Q9HCE1 1003 aaKnown RBP8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 PNPOQ9NVS9 261 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 TMEM45AQ9NWC5 275 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 THUMPD1Q9NXG2 353 aaKnown RBP8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 PRDM4Q9UKN5 801 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF232Q9UNY5 417 aa8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 YLPM1P49750 1951 aaKnown RBP8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 NSD1Q96L73 2696 aaPredicted RBP8.44□□□□□ -1.06
PPFIA1-223ENST00000532793 ZC3H12DA2A288 527 aaKnown RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 AQP7P3A6NL99 342 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 ELOA3DA6NLF2 546 aaPredicted RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 A8MVM7 634 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 ATP6V1G2-DDX39BF2Z307 99 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 SLCO1B7G3V0H7 640 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 HDAC3O15379 428 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 GPRIN2O60269 458 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 AHSA1O95433 338 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 GKN3PP0CG01 181 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 FAM157CP0CG43 387 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 KITP10721 976 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 IDO1P14902 403 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 RPS4Y1P22090 263 aaKnown RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 USF1P22415 310 aaPredicted RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 PDLIM4P50479 330 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 FOXG1P55316 489 aaPredicted RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 VLDLRP98155 873 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 BST1Q10588 318 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 ELOA3BQ3SY89 546 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 C6orf10Q5SRN2 563 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 AP1ARQ63HQ0 302 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 ATG16L1Q676U5 607 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 NIPAL3Q6P499 406 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 B3GLCTQ6Y288 498 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF836Q6ZNA1 936 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC46A3Q7Z3Q1 461 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 TMEM99Q8N816 258 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 WDR31Q8NA23 367 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 ELOA3Q8NG57 546 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 VRK1Q99986 396 aaPredicted RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 RAD21L1Q9H4I0 556 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 MYOZ1Q9NP98 299 aaPredicted RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 RPS6KB2Q9UBS0 482 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 HAO1Q9UJM8 370 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 MOKQ9UQ07 419 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 V9GYY5 206 aaPredicted RBP8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 ABCA1O95477 2261 aa8.43□□□□□ -1.06
PPFIA1-223ENST00000532793 CSPG4Q6UVK1 2322 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 PRAMEF27A3QJZ7 478 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 CDHR4A6H8M9 788 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 LIPT2A6NK58 231 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 C5orf58C9J3I9 102 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 PDLIM1O00151 329 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 NDUFS8O00217 210 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 SDHDO14521 159 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 KLF11O14901 512 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 AKAP8O43823 692 aaKnown RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC22A3O75751 556 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ALDOCP09972 364 aaKnown RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF16P17020 682 aaPredicted RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 HNF1AP20823 631 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 EPHA3P29320 983 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 NTF4P34130 210 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 CDKN2CP42773 168 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 GZMKP49863 264 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 IL1RL1Q01638 556 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 GGTLC2Q14390 218 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 TBRG1Q3YBR2 411 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 IQCCQ4KMZ1 466 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 HIKESHIQ53FT3 197 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 COX20Q5RI15 118 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 RNF220Q5VTB9 566 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 C1orf140Q5VVS0 124 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 FAM166AQ6J272 317 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 VRK2Q86Y07 508 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 C10orf105Q8TEF2 133 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 C3orf49Q96BT1 292 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC25A36Q96CQ1 311 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ITCHQ96J02 903 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 TEX37Q96LM6 180 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF385AQ96PM9 386 aaKnown RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF317Q96PQ6 595 aaPredicted RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ALKBH3Q96Q83 286 aaPredicted RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 SLC38A2Q96QD8 506 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ADAM19Q9H013 955 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 WDR55Q9H6Y2 383 aaPredicted RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 THAP1Q9NVV9 213 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 RLIMQ9NVW2 624 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 NKIRAS1Q9NYS0 192 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 FBXO9Q9UK97 447 aaPredicted RBP8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 KCNS2Q9ULS6 477 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 RASD1Q9Y272 281 aa8.42□□□□□ -1.06
PPFIA1-223ENST00000532793 ZNF443Q9Y2A4 671 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms