RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MT-ND4P03905 459 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 OPN1LWP04000 364 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 AKR1C4P17516 323 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 AIMP2Q13155 320 aaKnown RBP14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC35D2Q76EJ3 337 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 YIPF6Q96EC8 236 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 Q96M85 177 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 NINQ8N4C6 2090 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 TMEM212A6NML5 194 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC22A5O76082 557 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 CSNK1A1P48729 337 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 AQP6Q13520 282 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 KCNJ8Q15842 424 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 GXYLT1Q4G148 440 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 ABHD17BQ5VST6 288 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 NKAIN2Q5VXU1 208 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 OR5D14Q8NGL3 314 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 TMEM106AQ96A25 262 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 WDR34Q96EX3 536 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC41A2Q96JW4 573 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 OR7A10O76100 309 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 IGHG1P01857 330 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF28P17035 718 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 Q499Y3 187 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 CCDC58Q4VC31 144 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 FAM205BPQ63HN1 556 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 PAPD4Q6PIY7 484 aaKnown RBP14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF100Q8IYN0 542 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 OR5H2Q8NGV7 314 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 PHYHIPQ92561 330 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 HLA-CQ95604 372 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC25A46Q96AG3 418 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF707Q96C28 371 aaPredicted RBP14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 A0A087WV62 115 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 TMED7-TICAM2A0A0A6YYA0 188 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF593O00488 134 aaPredicted RBP14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 UBL3O95164 117 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 WISP3O95389 354 aaPredicted RBP14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 CCR5P51681 352 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 YBX1P67809 324 aaKnown RBP14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 MRPL49Q13405 166 aaKnown RBP14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 OXA1LQ15070 435 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 ZMAT1Q5H9K5 638 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 ABHD12BQ7Z5M8 362 aaPredicted RBP14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 CELF2-AS1Q8N7Q2 184 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 ELMOD3Q96FG2 381 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC25A19Q9HC21 320 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 CMC2Q9NRP2 79 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 NDUFB11Q9NX14 153 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 PLEK2Q9NYT0 353 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 TMED7Q9Y3B3 224 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF850A8MQ14 1090 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 PSPHP78330 225 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 LPAL2Q16609 132 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 LGALS14Q8TCE9 139 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 FOXRED1Q96CU9 486 aaPredicted RBP14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 OR14A2Q96R54 314 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 WDR76Q9H967 626 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 PCDH10Q9P2E7 1040 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 NPFFR2Q9Y5X5 522 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 EEF1E1-BLOC1S5C9J1V9 151 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 DPM1O60762 260 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 RFPL3O75679 317 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 KCNK2O95069 426 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 NSA2O95478 260 aaKnown RBP14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 LSSP48449 732 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 C17orf67Q0P5P2 114 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 UBE2NLQ5JXB2 153 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC35D3Q5M8T2 416 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 OR2M2Q96R28 347 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC38A1Q9H2H9 487 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 SIRT5Q9NXA8 310 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 CORINQ9Y5Q5 1042 aa14.13□□□□□ -0.15
PCDHA3-202ENST00000532566 A0A0G2JMP0 313 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 TBX19O60806 448 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 LCATP04180 440 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 CLDN12P56749 244 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 SPOCK1Q08629 439 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 MALLQ13021 153 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 RUNX2Q13950 521 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 MLC1Q15049 377 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 RSU1Q15404 277 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 ELAVL1Q15717 326 aaKnown RBP14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 C8orf82Q6P1X6 216 aaPredicted RBP14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 FAM198BQ6UWH4 519 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 OR4M2Q8NGB6 313 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 NPRL2Q8WTW4 380 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 RASD2Q96D21 266 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 SLC5A7Q9GZV3 580 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 C11orf54Q9H0W9 315 aaPredicted RBP14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF442Q9H7R0 627 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 OR2S2Q9NQN1 319 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 SERGEFQ9UGK8 458 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 HIF3AQ9Y2N7 669 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 MEN1O00255 615 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 CRTAPO75718 401 aaPredicted RBP14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 CSNK2A1P68400 391 aaPredicted RBP14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 EEF1A2Q05639 463 aaKnown RBP14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 GSG1LQ6UXU4 331 aa14.12□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF547Q8IVP9 402 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms