RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SEZ6L2Q6UXD5 910 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 TMEM108Q6UXF1 575 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 CREB3L2Q70SY1 520 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 ABHD12BQ7Z5M8 362 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 NET1Q7Z628 596 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 SMAP2Q8WU79 429 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 SLC38A4Q969I6 547 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 KTI12Q96EK9 354 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 RADILQ96JH8 1075 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 C18orf12Q96KH6 178 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 SLCO5A1Q9H2Y9 848 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 TESQ9UGI8 421 aaKnown RBP15.16■□□□□ 0.02
PHRF1-204ENST00000532550 SLC25A15Q9Y619 301 aa15.16■□□□□ 0.02
PHRF1-204ENST00000532550 A0A1W2PR80 420 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 FTCDNL1E5RQL4 147 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 M0QX08 132 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 PDLIM1O00151 329 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 MPGP29372 298 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 ZNF83P51522 516 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 P2RY4P51582 365 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 RPS4XP62701 263 aaKnown RBP15.15■□□□□ 0.02
PHRF1-204ENST00000532550 DMTNQ08495 405 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 SELPLGQ14242 412 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 OR1Q1Q15612 314 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 COMTD1Q86VU5 262 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 RANBP3LQ86VV4 465 aaPredicted RBP15.15■□□□□ 0.02
PHRF1-204ENST00000532550 PTOV1Q86YD1 416 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 SLC30A8Q8IWU4 369 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 SMYD1Q8NB12 490 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 KBTBD8Q8NFY9 601 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 IGFBPL1Q8WX77 278 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 NEUROG1Q92886 237 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 TAAR8Q969N4 342 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 Q96MF0 132 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 PTDSS2Q9BVG9 487 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 KAT8Q9H7Z6 458 aaKnown RBP15.15■□□□□ 0.02
PHRF1-204ENST00000532550 FGFR1OP2Q9NVK5 253 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 CISD1Q9NZ45 108 aaKnown RBP15.15■□□□□ 0.02
PHRF1-204ENST00000532550 NPAP1Q9NZP6 1156 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 MGAT4BQ9UQ53 548 aa15.15■□□□□ 0.02
PHRF1-204ENST00000532550 OR6C65A6NJZ3 312 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 ABCD4O14678 606 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 INHBBP09529 407 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 PAX1P15863 534 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 ZNF43P17038 809 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 CDH2P19022 906 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-204ENST00000532550 PTAFRP25105 342 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 PCBP3P57721 371 aaKnown RBP15.14■□□□□ 0.01
PHRF1-204ENST00000532550 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■■■■□ 25.4
PHRF1-204ENST00000532550 MMEL1Q495T6 779 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 FAM69AQ5T7M9 428 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 EPHX4Q8IUS5 362 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 DEPDC4Q8N2C3 294 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-204ENST00000532550 KDM8Q8N371 416 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 C17orf78Q8N4C9 275 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 C1orf162Q8NEQ5 155 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-204ENST00000532550 OR10A6Q8NH74 314 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 SLC26A7Q8TE54 656 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 SH3GL1Q99961 368 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 BDH2Q9BUT1 245 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 C1QTNF6Q9BXI9 259 aa15.14■□□□□ 0.01
PHRF1-204ENST00000532550 GSX1Q9H4S2 264 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-204ENST00000532550 ZNF701Q9NV72 531 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-204ENST00000532550 TRAV36DV7A0A075B6V5 113 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 A0A087WUJ7 227 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 AIM2O14862 343 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 LGI1O95970 557 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 C8BP07358 591 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 DANCRP0C864 163 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 SELENOPP49908 381 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 ATP5J2P56134 94 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 PRPS1P60891 318 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 C1DQ13901 141 aaKnown RBP15.13■□□□□ 0.01
PHRF1-204ENST00000532550 DUSP7Q16829 419 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 C1QTNF12Q5T7M4 302 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 INTS11Q5TA45 600 aaKnown RBP15.13■□□□□ 0.01
PHRF1-204ENST00000532550 NANOGP8Q6NSW7 305 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 NIPAL3Q6P499 406 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 H1FNTQ75WM6 255 aaPredicted RBP15.13■□□□□ 0.01
PHRF1-204ENST00000532550 PATL1Q86TB9 770 aaKnown RBP15.13■□□□□ 0.01
PHRF1-204ENST00000532550 BIVMQ86UB2 503 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 WDR31Q8NA23 367 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 GTPBP3Q969Y2 492 aaKnown RBP15.13■□□□□ 0.01
PHRF1-204ENST00000532550 TRMT61AQ96FX7 289 aaKnown RBP15.13■□□□□ 0.01
PHRF1-204ENST00000532550 OXGR1Q96P68 337 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 EPYCQ99645 322 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 AMBRA1Q9C0C7 1298 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 NANOGQ9H9S0 305 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 SLC17A5Q9NRA2 495 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 FAIMQ9NVQ4 179 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 POU2F3Q9UKI9 436 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 B3GALT5Q9Y2C3 310 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 AMDHD2Q9Y303 409 aa15.13■□□□□ 0.01
PHRF1-204ENST00000532550 MAGED1Q9Y5V3 778 aaPredicted RBP15.13■□□□□ 0.01
PHRF1-204ENST00000532550 A0A0B4J2E0 115 aa15.12■□□□□ 0.01
PHRF1-204ENST00000532550 A0A1B0GX12 115 aa15.12■□□□□ 0.01
PHRF1-204ENST00000532550 SHISA9B4DS77 424 aa15.12■□□□□ 0.01
PHRF1-204ENST00000532550 ZNF587BE7ETH6 402 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms