RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CIDECQ96AQ7 238 aaPredicted RBP7□□□□□ -1.29
CD44-232ENST00000531118 CHMP6Q96FZ7 201 aa7□□□□□ -1.29
CD44-232ENST00000531118 C16orf58Q96GQ5 468 aa7□□□□□ -1.29
CD44-232ENST00000531118 ZNF385AQ96PM9 386 aaKnown RBP7□□□□□ -1.29
CD44-232ENST00000531118 STACQ99469 402 aa7□□□□□ -1.29
CD44-232ENST00000531118 OR11A1Q9GZK7 315 aa7□□□□□ -1.29
CD44-232ENST00000531118 HOXD1Q9GZZ0 328 aa7□□□□□ -1.29
CD44-232ENST00000531118 MS4A5Q9H3V2 200 aa7□□□□□ -1.29
CD44-232ENST00000531118 ZNF385DQ9H6B1 395 aa7□□□□□ -1.29
CD44-232ENST00000531118 CTPS2Q9NRF8 586 aa7□□□□□ -1.29
CD44-232ENST00000531118 DUSP22Q9NRW4 184 aa7□□□□□ -1.29
CD44-232ENST00000531118 SIRT5Q9NXA8 310 aa7□□□□□ -1.29
CD44-232ENST00000531118 TESQ9UGI8 421 aaKnown RBP7□□□□□ -1.29
CD44-232ENST00000531118 TMCO1Q9UM00 188 aa7□□□□□ -1.29
CD44-232ENST00000531118 DTNAQ9Y4J8 743 aa7□□□□□ -1.29
CD44-232ENST00000531118 POLR3HQ9Y535 204 aaPredicted RBP7□□□□□ -1.29
CD44-232ENST00000531118 A0A096LPK6 155 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 MDFIC2A0A1B0GVS7 189 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 ZNF503-AS2A6NEH8 195 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 CCDC188H7C350 402 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 SMIM24O75264 130 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 NDUFA7O95182 113 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 NGFP01138 241 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 CBR1P16152 277 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 HMOX2P30519 316 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 MAGEB1P43366 347 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 ATP12AP54707 1039 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 H3F3AP84243 136 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 LASP1Q14847 261 aaKnown RBP6.99□□□□□ -1.29
CD44-232ENST00000531118 RASA2Q15283 850 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 TAF9Q16594 264 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 ZNF385BQ569K4 471 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 PDZK1Q5T2W1 519 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 ANKRD26P1Q6NSI1 321 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 C11orf87Q6NUJ2 197 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 C16orf87Q6PH81 154 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 SYT10Q6XYQ8 523 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 ZNF662Q6ZS27 426 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 ZNF771Q7L3S4 317 aaPredicted RBP6.99□□□□□ -1.29
CD44-232ENST00000531118 LINGO2Q7L985 606 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 AAED1Q7RTV5 226 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 SPC24Q8NBT2 197 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 NOA1Q8NC60 698 aaKnown RBP6.99□□□□□ -1.29
CD44-232ENST00000531118 TMEM234Q8WY98 164 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 RAB8BQ92930 207 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 AURKBQ96GD4 344 aaPredicted RBP6.99□□□□□ -1.29
CD44-232ENST00000531118 THUMPD3Q9BV44 507 aaKnown RBP6.99□□□□□ -1.29
CD44-232ENST00000531118 CCDC106Q9BWC9 280 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 C1QTNF3Q9BXJ4 246 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 TRIM31Q9BZY9 425 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 ACER3Q9NUN7 267 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 KLHL21Q9UJP4 597 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 PURGQ9UJV8 347 aaKnown RBP6.99□□□□□ -1.29
CD44-232ENST00000531118 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
CD44-232ENST00000531118 WIPI2Q9Y4P8 454 aa6.99□□□□□ -1.29
CD44-232ENST00000531118 PPIAL4EA0A075B759 164 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 PPIAL4CA0A0B4J2A2 164 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 CENPVL1A0A0U1RR11 272 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 A0A1W2PPW3 197 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 CLPSL1A2RUU4 121 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 A8MT66 165 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 TRIM49D1C9J1S8 452 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 CLDN25C9JDP6 229 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 PPIAL4DF5H284 164 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 ANKRD28O15084 1053 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 CDC14BO60729 498 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 EIF1BO60739 113 aaKnown RBP6.98□□□□□ -1.29
CD44-232ENST00000531118 ULK1O75385 1050 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 CYP7B1O75881 506 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 KRT33AO76009 404 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 SEC14L2O76054 403 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 HTR3BO95264 441 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 GPANK1O95872 356 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 PPIAL4FP0DN26 164 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 NAT2P11245 290 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 BCKDHAP12694 445 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 SELEP16581 610 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 NR4A1P22736 598 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 APOBEC1P41238 236 aaKnown RBP6.98□□□□□ -1.29
CD44-232ENST00000531118 SERPINB8P50452 374 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 SH3BGRP55822 239 aaPredicted RBP6.98□□□□□ -1.29
CD44-232ENST00000531118 NAB1Q13506 487 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 FAM189A2Q15884 450 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 C2orf68Q2NKX9 166 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 MROH9Q5TGP6 573 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 ZCCHC12Q6PEW1 402 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 C9orf139Q6ZV77 190 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 CYS1Q717R9 158 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 MDP1Q86V88 176 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 LRP11Q86VZ4 500 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 ZIC4Q8N9L1 334 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 OR9K2Q8NGE7 335 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 TRIM44Q96DX7 344 aaPredicted RBP6.98□□□□□ -1.29
CD44-232ENST00000531118 FAM120BQ96EK7 910 aaKnown RBP6.98□□□□□ -1.29
CD44-232ENST00000531118 ZNF764Q96H86 408 aaPredicted RBP6.98□□□□□ -1.29
CD44-232ENST00000531118 EAF1Q96JC9 268 aaPredicted RBP6.98□□□□□ -1.29
CD44-232ENST00000531118 ZNF382Q96SR6 550 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 OSBPL9Q96SU4 736 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 GAL3ST1Q99999 423 aa6.98□□□□□ -1.29
CD44-232ENST00000531118 GATA5Q9BWX5 397 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms