RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 C19orf24Q9BVV8 132 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 MYOZ1Q9NP98 299 aaPredicted RBP13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 CALML5Q9NZT1 146 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 ZNF443Q9Y2A4 671 aaPredicted RBP13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 IGHV4-61A0A0C4DH41 118 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 SLC35F4A4IF30 521 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 CDHR4A6H8M9 788 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 A8MVM7 634 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 OR4A8P0C604 315 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 LARS2Q15031 903 aaKnown RBP13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 SWI5Q1ZZU3 235 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 FAM120AOSQ5T036 256 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 OGFOD2Q6N063 350 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 ANKRD42Q8N9B4 389 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 SLC25A36Q96CQ1 311 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 BPESC1Q9GZL8 116 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 ARMC7Q9H6L4 198 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 PLCE1Q9P212 2302 aa13.78□□□□□ -0.2
CHMP4A-204ENST00000530996 LOC390937A0A1W2PQ73 354 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 OR6C65A6NJZ3 312 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 B9A039 149 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 NR5A2O00482 541 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 SDHDO14521 159 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 VAMP5O95183 116 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 CECR9P0C854 216 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 ETFAP13804 333 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 EPHA3P29320 983 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 IL12AP29459 219 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 CAPZA2P47755 286 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 DSTNP60981 165 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 ROR2Q01974 943 aaKnown RBP13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 NAAAQ02083 359 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 NPRL3Q12980 569 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 MST1LQ2TV78 715 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 AP1ARQ63HQ0 302 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 MSI2Q96DH6 328 aaKnown RBP13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 FOXN4Q96NZ1 517 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 PRR14Q9BWN1 585 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 ADAM19Q9H013 955 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 PIF1Q9H611 641 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 DYNLRB1Q9NP97 96 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 RASD1Q9Y272 281 aa13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 V9GYY5 206 aaPredicted RBP13.77□□□□□ -0.21
CHMP4A-204ENST00000530996 NUP214P35658 2090 aaPredicted RBP13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 A0A096LPI6 279 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 VWC2LB2RUY7 222 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 UPK3AO75631 287 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 PDE5AO76074 875 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 TGFAP01135 160 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 KITP10721 976 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 IDH3GP51553 393 aaPredicted RBP13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 CLDN17P56750 224 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 BST1Q10588 318 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 ADIPOQQ15848 244 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 C6orf10Q5SRN2 563 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 RNF220Q5VTB9 566 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 HHATQ5VTY9 493 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 ANKRD16Q6P6B7 361 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 CREB3L2Q70SY1 520 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 SERPINA11Q86U17 422 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF540Q8NDQ6 660 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 RAB1BQ9H0U4 201 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 WDR55Q9H6Y2 383 aaPredicted RBP13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 SEC61A2Q9H9S3 476 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 MOV10Q9HCE1 1003 aaKnown RBP13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 SSU72Q9NP77 194 aaKnown RBP13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 RPS6KB2Q9UBS0 482 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 HAO1Q9UJM8 370 aa13.76□□□□□ -0.21
CHMP4A-204ENST00000530996 DSPPQ9NZW4 1301 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 ARPC4-TTLL3A0A0A6YYG9 625 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 SLC43A1O75387 559 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 C8BP07358 591 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 PNMTP11086 282 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 PRG2P13727 222 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF23P17027 643 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF43P17038 809 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 RPS5P46782 204 aaKnown RBP13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 PPOXP50336 477 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 SH3BGRP55822 239 aaPredicted RBP13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 GPR137CQ8N3F9 429 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 SVOPLQ8N434 492 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 GLB1L3Q8NCI6 653 aaPredicted RBP13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 OR4F15Q8NGB8 312 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 BCL2L2Q92843 193 aaPredicted RBP13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 TMEM19Q96HH6 336 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 RMND5AQ9H871 391 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 SLC6A13Q9NSD5 602 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF232Q9UNY5 417 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 ALPK2Q86TB3 2170 aa13.75□□□□□ -0.21
CHMP4A-204ENST00000530996 SH3PXD2BA1X283 911 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 VSTM5A8MXK1 200 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 TMEM229AB2RXF0 380 aa13.74□□□□□ -0.21
CHMP4A-204ENST00000530996 SEC14L2O76054 403 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms