RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MMP15P51511 669 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 MRPL28Q13084 256 aaKnown RBP15.71■□□□□ 0.11
BRCA2-204ENST00000530893 GPR176Q14439 515 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 CD226Q15762 336 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 HSD17B12Q53GQ0 312 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 CCDC92Q53HC0 331 aaPredicted RBP15.71■□□□□ 0.11
BRCA2-204ENST00000530893 CEP78Q5JTW2 689 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 FAM122BQ7Z309 247 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 ZNF687Q8N1G0 1237 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 ASCC1Q8N9N2 400 aaKnown RBP15.71■□□□□ 0.11
BRCA2-204ENST00000530893 OR13C5Q8NGS8 318 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 OR6K6Q8NGW6 343 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 FYTTD1Q96QD9 318 aaKnown RBP15.71■□□□□ 0.11
BRCA2-204ENST00000530893 ABCG5Q9H222 651 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 CUTCQ9NTM9 273 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 ACOXLQ9NUZ1 547 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 C2orf42Q9NWW7 574 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 ING3Q9NXR8 418 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 SPATA2Q9UM82 520 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 SPTBP11277 2137 aa15.71■□□□□ 0.11
BRCA2-204ENST00000530893 IGKV3D-11A0A0A0MRZ8 115 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 FAM47E-STBD1D6RA91 191 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 SELENOFO60613 162 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 UTS2O95399 124 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ASAH2BP0C7U1 165 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ERP29P30040 261 aaKnown RBP15.7■□□□□ 0.1
BRCA2-204ENST00000530893 CD83Q01151 205 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 C14orf28Q4W4Y0 310 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 PLA1AQ53H76 456 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 YIF1BQ5BJH7 314 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ALG10Q5BKT4 473 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 LINC01590Q5TEZ4 76 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 LEG1Q6P5S2 330 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 TMEM151BQ8IW70 566 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 SLC35F3Q8IY50 421 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 GPR135Q8IZ08 494 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 LRRC75AQ8NAA5 344 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 MOSPD2Q8NHP6 518 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 RASD2Q96D21 266 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ABHD1Q96SE0 405 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ALG12Q9BV10 488 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 LMAN1LQ9HAT1 526 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 RXFP3Q9NSD7 469 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 COPS3Q9UNS2 423 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 CACNG2Q9Y698 323 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 TEX13CA0A0J9YWL9 993 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 H3BMH7 237 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 BLOC1S5-TXNDC5H3BN57 136 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 PDCD5O14737 125 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 IGKV3-11P04433 115 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 TACSTD2P09758 323 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ATF1P18846 271 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 UQCRC1P31930 480 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 RRAS2P62070 204 aaPredicted RBP15.7■□□□□ 0.1
BRCA2-204ENST00000530893 SLC16A9Q7RTY1 509 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 GLCCI1Q86VQ1 547 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ZNRF4Q8WWF5 429 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 LMF1Q96S06 567 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 LAT2Q9GZY6 243 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 NXF5Q9H1B4 397 aaKnown RBP15.7■□□□□ 0.1
BRCA2-204ENST00000530893 PNO1Q9NRX1 252 aaKnown RBP15.7■□□□□ 0.1
BRCA2-204ENST00000530893 ZNF281Q9Y2X9 895 aa15.7■□□□□ 0.1
BRCA2-204ENST00000530893 OR2B3O76000 313 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 TFPIP10646 304 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 AQP2P41181 271 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 CCR4P51679 360 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 TDGQ13569 410 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 ELAVL1Q15717 326 aaKnown RBP15.69■□□□□ 0.1
BRCA2-204ENST00000530893 CCDC85BQ15834 202 aaPredicted RBP15.69■□□□□ 0.1
BRCA2-204ENST00000530893 ZNF684Q5T5D7 378 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 C10orf53Q8N6V4 93 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 GATSQ8NAP1 163 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 ADAMTS14Q8WXS8 1223 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 Q96M85 177 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 OR14A2Q96R54 314 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 MNTQ99583 582 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 C7orf50Q9BRJ6 194 aaKnown RBP15.69■□□□□ 0.1
BRCA2-204ENST00000530893 MRI1Q9BV20 369 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 TTTY10Q9BZA0 68 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 SLA2Q9H6Q3 261 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 NIPAL2Q9H841 368 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 COPZ2Q9P299 210 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 CAMK2AQ9UQM7 478 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 MAU2Q9Y6X3 613 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 KNL1Q8NG31 2342 aa15.69■□□□□ 0.1
BRCA2-204ENST00000530893 RHPN2P1A8MT19 583 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 CTDSPLO15194 276 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 MAGEB4O15481 346 aaPredicted RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 EEF1E1O43324 174 aaKnown RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 LANCL1O43813 399 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 SRMP19623 302 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 RCVRNP35243 200 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 CDKN2AP42771 156 aaKnown RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 HSD11B2P80365 405 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 EGR4Q05215 589 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 GXYLT1Q4G148 440 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 CBLN3Q6UW01 205 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 TTLL10Q6ZVT0 673 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 EXD3Q8N9H8 876 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 ZPLD1Q8TCW7 415 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms