RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 HKR1P10072 659 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 ZFP36P26651 326 aaKnown RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 FKBP2P26885 142 aaKnown RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 P2RY4P51582 365 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 ROR2Q01974 943 aaKnown RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 BNIP2Q12982 314 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 PDCD2Q16342 344 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 TNFAIP8L2Q6P589 184 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 C1QL2Q7Z5L3 287 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 MDP1Q86V88 176 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 EPHX4Q8IUS5 362 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 ACMSDQ8TDX5 336 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 TWIST2Q8WVJ9 160 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 ZNF837Q96EG3 531 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 DUSP26Q9BV47 211 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 SF3B5Q9BWJ5 86 aaKnown RBP16.29■□□□□ 0.2
SSRP1-204ENST00000529002 ADPRHL2Q9NX46 363 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 FZR1Q9UM11 496 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 CMAHPQ9Y471 501 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 VWFP04275 2813 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 NOTCH1P46531 2555 aa16.29■□□□□ 0.2
SSRP1-204ENST00000529002 RNF103-CHMP3A0A140T963 221 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 DUXAA6NLW8 204 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 M0R233 179 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 SYNGR3O43761 229 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 PLIN3O60664 434 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 ACHEP22303 614 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 CASQ1P31415 396 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 UGT3A2Q3SY77 523 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 FAM153CQ494X1 144 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 AVPI1Q5T686 147 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 TMEM225Q6GV28 225 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 CREB3L2Q70SY1 520 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 KDM8Q8N371 416 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 BPIFB2Q8N4F0 458 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 FAM169BQ8N8A8 192 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 RNF217Q8TC41 542 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 RDH5Q92781 318 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 PMM1Q92871 262 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 ROPN1LQ96C74 230 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 MS4A3Q96HJ5 214 aa16.28■□□□□ 0.2
SSRP1-204ENST00000529002 GATA5Q9BWX5 397 aaPredicted RBP16.28■□□□□ 0.2
SSRP1-204ENST00000529002 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.28■□□□□ 0.2
SSRP1-204ENST00000529002 TMEM114B3SHH9 223 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 PLPP2O43688 288 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 GLRA3O75311 464 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 MPZL1O95297 269 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 BCL10O95999 233 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 GPIP06744 558 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 CHRNGP07510 517 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 CPA3P15088 417 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 RPL3P39023 403 aaKnown RBP16.27■□□□□ 0.2
SSRP1-204ENST00000529002 HTR3AP46098 478 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 NAA20P61599 178 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.2
SSRP1-204ENST00000529002 MYBPC1Q00872 1141 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 FOXL1Q12952 345 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 PGS1Q32NB8 556 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 SLC9B1Q4ZJI4 515 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 ZNF311Q5JNZ3 666 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 IL23RQ5VWK5 629 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 AP1ARQ63HQ0 302 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 OR4F3Q6IEY1 312 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 RNF165Q6ZSG1 346 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 RIMKLAQ8IXN7 391 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 C17orf53Q8N3J3 647 aaPredicted RBP16.27■□□□□ 0.2
SSRP1-204ENST00000529002 RIBC1Q8N443 379 aaPredicted RBP16.27■□□□□ 0.2
SSRP1-204ENST00000529002 CCDC63Q8NA47 563 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 KIF18AQ8NI77 898 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 AGR3Q8TD06 166 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 C3orf30Q96M34 536 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 UNKLQ9H9P5 680 aaKnown RBP16.27■□□□□ 0.2
SSRP1-204ENST00000529002 EXOSC3Q9NQT5 275 aaKnown RBP16.27■□□□□ 0.2
SSRP1-204ENST00000529002 EXD2Q9NVH0 621 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 ATAD3AQ9NVI7 634 aa16.27■□□□□ 0.2
SSRP1-204ENST00000529002 RP2O75695 350 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 CHEK2O96017 543 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 NAT2P11245 290 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 NR4A1P22736 598 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 CAPZA2P47755 286 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 ALKBH6Q3KRA9 238 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 SYT10Q6XYQ8 523 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 C10orf107Q8IVU9 208 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 LRRC17Q8N6Y2 441 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 DDX28Q9NUL7 540 aaKnown RBP16.26■□□□□ 0.19
SSRP1-204ENST00000529002 ZDHHC2Q9UIJ5 367 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 CORINQ9Y5Q5 1042 aa16.26■□□□□ 0.19
SSRP1-204ENST00000529002 CDC14BO60729 498 aa16.25■□□□□ 0.19
SSRP1-204ENST00000529002 PAX7P23759 505 aa16.25■□□□□ 0.19
SSRP1-204ENST00000529002 MVKQ03426 396 aa16.25■□□□□ 0.19
SSRP1-204ENST00000529002 GPAT3Q53EU6 434 aa16.25■□□□□ 0.19
SSRP1-204ENST00000529002 ZCCHC23Q6ZST2 131 aa16.25■□□□□ 0.19
SSRP1-204ENST00000529002 ZNF771Q7L3S4 317 aaPredicted RBP16.25■□□□□ 0.19
SSRP1-204ENST00000529002 ZNF665Q9H7R5 613 aa16.25■□□□□ 0.19
SSRP1-204ENST00000529002 PRSS23O95084 383 aa16.24■□□□□ 0.19
SSRP1-204ENST00000529002 ABHD2P08910 425 aa16.24■□□□□ 0.19
SSRP1-204ENST00000529002 MAPK1P28482 360 aa16.24■□□□□ 0.19
SSRP1-204ENST00000529002 ARR3P36575 388 aa16.24■□□□□ 0.19
SSRP1-204ENST00000529002 CLDN17P56750 224 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms