RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 RNF167Q9H6Y7 350 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 C12orf10Q9HB07 376 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 LANCL2Q9NS86 450 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 C20orf141Q9NUB4 165 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 BABAM2Q9NXR7 383 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 HAO2Q9NYQ3 351 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 TRAPPC4Q9Y296 219 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 PCDHGB6Q9Y5F9 930 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 MAU2Q9Y6X3 613 aa10.74□□□□□ -0.69
USF1-208ENST00000528768 A0A1B0GX78 115 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 C12orf71A8MTZ7 269 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 SOCS6O14544 535 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 CASKO14936 926 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 ZNF264O43296 627 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 TBX1O43435 398 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 OR7A10O76100 309 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 APOL3O95236 402 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 NTN1O95631 604 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 PPP1R3DO95685 299 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 IL12BP29460 328 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 SDC2P34741 201 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 RPL4P36578 427 aaKnown RBP10.73□□□□□ -0.69
USF1-208ENST00000528768 RPS25P62851 125 aaKnown RBP10.73□□□□□ -0.69
USF1-208ENST00000528768 GALEQ14376 348 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 SLC35D3Q5M8T2 416 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 SNAP47Q5SQN1 464 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 C22orf42Q6IC83 251 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 CD200R1LQ6Q8B3 271 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 KIRREL2Q6UWL6 708 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 PAMR1Q6UXH9 720 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 SHFQ7M4L6 423 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 LYSMD2Q8IV50 215 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 Q8N9G6 341 aaPredicted RBP10.73□□□□□ -0.69
USF1-208ENST00000528768 POC5Q8NA72 575 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 POMGNT2Q8NAT1 580 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 SLC37A3Q8NCC5 494 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 OR10H4Q8NGA5 316 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 SETD6Q8TBK2 473 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 PHOSPHO1Q8TCT1 267 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 TMCO6Q96DC7 493 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 ERMAPQ96PL5 475 aaPredicted RBP10.73□□□□□ -0.69
USF1-208ENST00000528768 TAAR9Q96RI9 348 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 TNFRSF13CQ96RJ3 184 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 TEAD3Q99594 435 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 TMEM43Q9BTV4 400 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 ALG8Q9BVK2 526 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 OR8D2Q9GZM6 311 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 OR51V1Q9H2C8 321 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 MEPEQ9NQ76 525 aaPredicted RBP10.73□□□□□ -0.69
USF1-208ENST00000528768 ZNF71Q9NQZ8 489 aaPredicted RBP10.73□□□□□ -0.69
USF1-208ENST00000528768 IL20RAQ9UHF4 553 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 NOX1Q9Y5S8 564 aa10.73□□□□□ -0.69
USF1-208ENST00000528768 TRAV27A0A087WT01 109 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 IGKV3D-11A0A0A0MRZ8 115 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 C2orf92A0A1B0GVN3 265 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 SLC35F4A4IF30 521 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 FAM183AA6NL82 134 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 HRKO00198 91 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 WWP2O00308 870 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 EIF4E2O60573 245 aaKnown RBP10.72□□□□□ -0.69
USF1-208ENST00000528768 REM1O75628 298 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 RGS9O75916 674 aaPredicted RBP10.72□□□□□ -0.69
USF1-208ENST00000528768 UTS2O95399 124 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 SLC2A10O95528 541 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 SERPINA3P01011 423 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 HIST1H2ABP04908 130 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 FUT1P19526 365 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 TNFSF8P32971 234 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 OR1D4P47884 311 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 SLC37A1P57057 533 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 ACTA2P62736 377 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 PPP3R1P63098 170 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 ACTG2P63267 376 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 HNRNPA0Q13151 305 aaKnown RBP10.72□□□□□ -0.69
USF1-208ENST00000528768 PON3Q15166 354 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 HIST3H2AQ7L7L0 130 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 NUP54Q7Z3B4 507 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 SLC22A16Q86VW1 577 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 KLBQ86Z14 1044 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 C10orf53Q8N6V4 93 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 BBS1Q8NFJ9 593 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 OR1L3Q8NH93 324 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 ZNF563Q8TA94 476 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 PTPMT1Q8WUK0 201 aaPredicted RBP10.72□□□□□ -0.69
USF1-208ENST00000528768 ACOT12Q8WYK0 555 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 HIST1H2ACQ93077 130 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 TMEM203Q969S6 136 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 KIAA1143Q96AT1 154 aaPredicted RBP10.72□□□□□ -0.69
USF1-208ENST00000528768 ITPKCQ96DU7 683 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 ABHD17AQ96GS6 310 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 LAT2Q9GZY6 243 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 ZNF768Q9H5H4 540 aaKnown RBP10.72□□□□□ -0.69
USF1-208ENST00000528768 SF3B6Q9Y3B4 125 aaKnown RBP10.72□□□□□ -0.69
USF1-208ENST00000528768 CLDN16Q9Y5I7 305 aa10.72□□□□□ -0.69
USF1-208ENST00000528768 CELSR2Q9HCU4 2923 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 A0A1W2PQD3 144 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 TCRBV16S1A1N1A0A5B0 115 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 A8MUA0 341 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 J3QRE1 110 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms