RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 ALX4Q9H161 411 aaPredicted RBP2.78□□□□□ -1.96
CD44-229ENST00000528672 MMP28Q9H239 520 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 GOLPH3Q9H4A6 298 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 GEMIN7Q9H840 131 aaKnown RBP2.78□□□□□ -1.96
CD44-229ENST00000528672 Q9HAA7 133 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 MEAF6Q9HAF1 191 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 B3GAT2Q9NPZ5 323 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 FAIMQ9NVQ4 179 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 RMND1Q9NWS8 449 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 DUS2Q9NX74 493 aaKnown RBP2.78□□□□□ -1.96
CD44-229ENST00000528672 ADAM22Q9P0K1 906 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 SLC17A7Q9P2U7 560 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 EMCNQ9ULC0 261 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 ERVW-1Q9UQF0 538 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 WDR45Q9Y484 360 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 SLC22A7Q9Y694 548 aa2.78□□□□□ -1.96
CD44-229ENST00000528672 NCAPD3P42695 1498 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 A0A1W2PQ72 361 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 METTL21EPA6NDL7 271 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 FABP12A6NFH5 140 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 MGAT4DA6NG13 374 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ERI2A8K979 691 aaKnown RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 ZNF724A8MTY0 619 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 F8W036 122 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 PRAMEF26H0Y7S4 382 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TOR1AO14656 332 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ARPC3O15145 178 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 STX11O75558 287 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 CCNKO75909 580 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TOXO94900 526 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 OAS1P00973 400 aaKnown RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 AMBPP02760 352 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TRIM49P0CI25 452 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TRIM49CP0CI26 452 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SLC35E2BP0CK96 405 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SLC35E2P0CK97 266 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ANXA3P12429 323 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ZNF26P17031 533 aaPredicted RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 ZNF7P17097 686 aaPredicted RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 CALML3P27482 149 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TEAD1P28347 426 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 CRABP1P29762 137 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 CHRNB4P30926 498 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TGFBR2P37173 567 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SLC1A2P43004 574 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 OMPP47874 163 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 CCR8P51685 355 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TAS2R60P59551 318 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 PSME3P61289 254 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SNRPD1P62314 119 aaKnown RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 ARF6P62330 175 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 VSNL1P62760 191 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 BDH1Q02338 343 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 IRF8Q02556 426 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 RELAQ04206 551 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ZFP36L1Q07352 338 aaKnown RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 FGL1Q08830 312 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SLAMF1Q13291 335 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 MLF2Q15773 248 aaPredicted RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 SLC15A2Q16348 729 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SSX2Q16385 188 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SYPL1Q16563 259 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ECSCRQ19T08 205 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 CHRFAM7AQ494W8 412 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 UNC50Q53HI1 259 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 PRAMEF5Q5TYX0 476 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 PRAMEF6Q5VXH4 476 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ADNP2Q6IQ32 1131 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 FAM53AQ6NSI3 398 aaPredicted RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 ATRAIDQ6UW56 229 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 NPSR1Q6W5P4 371 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TMEM184AQ6ZMB5 413 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 LRRC74BQ6ZQY2 392 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 EIF3MQ7L2H7 374 aaKnown RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 ABHD12BQ7Z5M8 362 aaPredicted RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 PARGQ86W56 976 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 CATSPERDQ86XM0 798 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 RBM45Q8IUH3 476 aaKnown RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 BBS7Q8IWZ6 715 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 KLHDC8BQ8IXV7 354 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 C17orf78Q8N4C9 275 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 ATP6V0D2Q8N8Y2 350 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 SYT14Q8NB59 555 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 OR4F17Q8NGA8 305 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 MRGPRDQ8TDS7 321 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 RPL3LQ92901 407 aaKnown RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 ART4Q93070 314 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TADA1Q96BN2 335 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 B3GALT6Q96L58 329 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 PACRGQ96M98 296 aaPredicted RBP2.77□□□□□ -1.97
CD44-229ENST00000528672 MBOAT7Q96N66 472 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 PGLYRP2Q96PD5 576 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 OR4F4Q96R69 305 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TNFRSF13CQ96RJ3 184 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 NPAS2Q99743 824 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 OVOL2Q9BRP0 275 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 NAT9Q9BTE0 207 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 TMEM43Q9BTV4 400 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 HINT2Q9BX68 163 aa2.77□□□□□ -1.97
CD44-229ENST00000528672 GPR174Q9BXC1 333 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms