RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 WNT11O96014 354 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 ZCCHC18P0CG32 403 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 IDO1P14902 403 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 NCF2P19878 526 aaPredicted RBP13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 CRISP3P54108 245 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 CHRNB3Q05901 458 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 SWI5Q1ZZU3 235 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 ATG16L1Q676U5 607 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 NIPAL3Q6P499 406 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 PODNL1Q6PEZ8 512 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 OR1K1Q8NGR3 316 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 MAL2Q969L2 176 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 KCNK17Q96T54 332 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 REPIN1Q9BWE0 567 aaKnown RBP13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 SEC14L4Q9UDX3 406 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 ZNF232Q9UNY5 417 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 PMF1-BGLAPU3KQ54 211 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 A0A0G2JPF8 293 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 HNRNPCL2B2RXH8 293 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 HNRNPCL3B7ZW38 293 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 HNRNPCL1O60812 293 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 F12P00748 615 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 HNRNPCL4P0DMR1 293 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 IGHV4-31P0DP07 118 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 SLC25A16P16260 332 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 POLR2JP52435 117 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 VLDLRP98155 873 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 EGR4Q05215 589 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 LARS2Q15031 903 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 C6orf10Q5SRN2 563 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 RNF220Q5VTB9 566 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 PHC2Q8IXK0 858 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 ARIH2OSQ8N7S6 290 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 KTI12Q96EK9 354 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 ITCHQ96J02 903 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 SORCS2Q96PQ0 1159 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 ALKBH3Q96Q83 286 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 PTDSS2Q9BVG9 487 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 PRR14Q9BWN1 585 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 PIF1Q9H611 641 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 SDR39U1Q9NRG7 319 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 CALML5Q9NZT1 146 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 ZIM2Q9NZV7 527 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 PCDHB14Q9Y5E9 798 aa13.53□□□□□ -0.24
CLNS1A-210ENST00000528364 TMEM229AB2RXF0 380 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF587BE7ETH6 402 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 UBDO15205 165 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 IFNA2P01563 188 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 USF1P22415 310 aaPredicted RBP13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 RPS5P46782 204 aaKnown RBP13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 MAGOHP61326 146 aaKnown RBP13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 RGNQ15493 299 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF311Q5JNZ3 666 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 PRAMEF8Q5VWM4 474 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 PRAMEF7Q5VXH5 474 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 CYB5R2Q6BCY4 276 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 ANKRD16Q6P6B7 361 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 SLC2A7Q6PXP3 512 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 ANKS4BQ8N8V4 417 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 GTF2H4Q92759 462 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 BOD1Q96IK1 185 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 PAIP1Q9H074 479 aaKnown RBP13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 NELFAQ9H3P2 528 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 RMND5AQ9H871 391 aa13.52□□□□□ -0.25
CLNS1A-210ENST00000528364 SLCO1B7G3V0H7 640 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 VAMP5O95183 116 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 PNMTP11086 282 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF16P17020 682 aaPredicted RBP13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 CALCRP30988 508 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 CLDN17P56750 224 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 LSM11P83369 360 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 ARF1P84077 181 aaKnown RBP13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 CARTPTQ16568 116 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 VHLLQ6RSH7 139 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 COMTD1Q86VU5 262 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 MFSD8Q8NHS3 518 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 STK35Q8TDR2 534 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 PROX1Q92786 737 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 TAAR8Q969N4 342 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF837Q96EG3 531 aaPredicted RBP13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 FOXN4Q96NZ1 517 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 VRK1Q99986 396 aaPredicted RBP13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 SLAMF8Q9P0V8 285 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 RASD1Q9Y272 281 aa13.51□□□□□ -0.25
CLNS1A-210ENST00000528364 VWC2LB2RUY7 222 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 CLIC1O00299 241 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF432O94892 652 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 AHSA1O95433 338 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 CELA3BP08861 270 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 CECR9P0C854 216 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 FAM157CP0CG43 387 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 BMP4P12644 408 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 CBLP22681 906 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 SERPINF1P36955 418 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms