RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MAPRE2Q15555 327 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 FAM69AQ5T7M9 428 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 PRSS57Q6UWY2 283 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 AAED1Q7RTV5 226 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 PATL1Q86TB9 770 aaKnown RBP29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 RANBP3LQ86VV4 465 aaPredicted RBP29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 SH3GL1Q99961 368 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 GSX2Q9BZM3 304 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 SLCO5A1Q9H2Y9 848 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 SELENONQ9NZV5 590 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 IGKV1D-42A0A075B6H8 117 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 A0A0B4J2E0 115 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 A0A1B0GX12 115 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 DPRXA6NFQ7 191 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 RPS5P46782 204 aaKnown RBP29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 GUCY1A3Q02108 690 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 TGFBR3Q03167 851 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 KLF10Q13118 480 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 GABRA6Q16445 453 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 INTS11Q5TA45 600 aaKnown RBP29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 CREB3L2Q70SY1 520 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 P3H2Q8IVL5 708 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 OR6S1Q8NH40 331 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 LILRB1Q8NHL6 650 aaPredicted RBP29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 SLC25A15Q9Y619 301 aa29.07■■■□□ 2.24
SSSCA1-205ENST00000527920 A0A087WUJ7 227 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 OR6C65A6NJZ3 312 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 M0QX08 132 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 FXYD1O00168 92 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 LGI1O95970 557 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 GTF2E2P29084 291 aaKnown RBP29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 MPGP29372 298 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 GZMMP51124 257 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 OR1Q1Q15612 314 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 NANOGP8Q6NSW7 305 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 ABHD12BQ7Z5M8 362 aaPredicted RBP29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 OR8J3Q8NGG0 315 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 OR10A6Q8NH74 314 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 TMEM171Q8WVE6 324 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 BOD1Q96IK1 185 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 ARHGDIGQ99819 225 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 NANOGQ9H9S0 305 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 NPAP1Q9NZP6 1156 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 KLHL14Q9P2G3 628 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 CADP27708 2225 aa29.06■■■□□ 2.24
SSSCA1-205ENST00000527920 TRAV36DV7A0A075B6V5 113 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 CLOCKO15516 846 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 TPST2O60704 377 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 FOXG1P55316 489 aaPredicted RBP29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 RIPPLY3P57055 190 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 MFSD13AQ14CX5 517 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 NRF1Q16656 503 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 DUSP7Q16829 419 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 ZNF672Q499Z4 452 aaPredicted RBP29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 SMYD1Q8NB12 490 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 TAAR8Q969N4 342 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 FBXW5Q969U6 566 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 SLC25A36Q96CQ1 311 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 LRRC58Q96CX6 371 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 PRR14Q9BWN1 585 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 CXorf56Q9H5V9 222 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 ZNF701Q9NV72 531 aaPredicted RBP29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 B3GALT5Q9Y2C3 310 aa29.05■■■□□ 2.24
SSSCA1-205ENST00000527920 C2CD3Q4AC94 2353 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 SLC22A2O15244 555 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 VMACQ2NL98 169 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 Q5PR19 223 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 ZNF613Q6PF04 617 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 EPHX4Q8IUS5 362 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 ADPRHL1Q8NDY3 354 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 RADILQ96JH8 1075 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 EPYCQ99645 322 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 WFDC6Q9BQY6 131 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 RCE1Q9Y256 329 aa29.04■■■□□ 2.24
SSSCA1-205ENST00000527920 LOC102725191A0A1B0GVB3 256 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 AIM2O14862 343 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 MMEL1Q495T6 779 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 REP15Q6BDI9 236 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 TMEM108Q6UXF1 575 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 CCDC80Q76M96 950 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 GPR32P1Q8NGA4 272 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 OR52N5Q8NH56 324 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 MGAT4BQ9UQ53 548 aa29.03■■■□□ 2.24
SSSCA1-205ENST00000527920 MRASO14807 208 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 PTAFRP25105 342 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 KLHL17Q6TDP4 642 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 CALHM3Q86XJ0 350 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 KBTBD8Q8NFY9 601 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 RASSF5Q8WWW0 418 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 OXGR1Q96P68 337 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 TMEM43Q9BTV4 400 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 SLC17A5Q9NRA2 495 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 AMDHD2Q9Y303 409 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 CORINQ9Y5Q5 1042 aa29.02■■■□□ 2.24
SSSCA1-205ENST00000527920 ATP8B1O43520 1251 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 OPN1SWP03999 348 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 MDH1P40925 334 aaKnown RBP29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 PTH2RP49190 550 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 CDH12P55289 794 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 RABL3Q5HYI8 236 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms