RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 LRFN1Q9P244 771 aa18.52■□□□□ 0.56
SMCO4-203ENST00000526869 MRPS18CQ9Y3D5 142 aaKnown RBP18.52■□□□□ 0.56
SMCO4-203ENST00000526869 IER3IP1Q9Y5U9 82 aa18.52■□□□□ 0.56
SMCO4-203ENST00000526869 MPDZO75970 2070 aa18.52■□□□□ 0.56
SMCO4-203ENST00000526869 TRABD2BA6NFA1 517 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 PRR23D1E9PI22 279 aaPredicted RBP18.51■□□□□ 0.55
SMCO4-203ENST00000526869 BLOC1S5-TXNDC5H3BN57 136 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 FADS2O95864 444 aaKnown RBP18.51■□□□□ 0.55
SMCO4-203ENST00000526869 PRR23D2P0DMB1 279 aaPredicted RBP18.51■□□□□ 0.55
SMCO4-203ENST00000526869 CNR1P21554 472 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 SRD5A2P31213 254 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 IDUAP35475 653 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 CD96P40200 585 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 MTNR1AP48039 350 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 CLN3Q13286 438 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 ITGADQ13349 1161 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 GPR139Q6DWJ6 353 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 NIPAL3Q6P499 406 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 TMIGD2Q96BF3 282 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 DGCR14Q96DF8 476 aaKnown RBP18.51■□□□□ 0.55
SMCO4-203ENST00000526869 CRELD1Q96HD1 420 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 KATNB1Q9BVA0 655 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 RNF32Q9H0A6 362 aa18.51■□□□□ 0.55
SMCO4-203ENST00000526869 WARS2Q9UGM6 360 aaKnown RBP18.51■□□□□ 0.55
SMCO4-203ENST00000526869 DIMT1Q9UNQ2 313 aaKnown RBP18.51■□□□□ 0.55
SMCO4-203ENST00000526869 ZNF891A8MT65 544 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-203ENST00000526869 ZNF99A8MXY4 864 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-203ENST00000526869 EFNA2O43921 213 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 NEURL1O76050 574 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 C21orf33P30042 268 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-203ENST00000526869 GRPRP30550 384 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 ZP4Q12836 540 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 CRMP1Q14194 572 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 GXYLT1Q4G148 440 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 SYT6Q5T7P8 510 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-203ENST00000526869 PLBD1Q6P4A8 553 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 CCDC81Q6ZN84 652 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 MEPCEQ7L2J0 689 aaKnown RBP18.5■□□□□ 0.55
SMCO4-203ENST00000526869 FAM122BQ7Z309 247 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 LGALS12Q96DT0 336 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 RNFT2Q96EX2 444 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 ANKRD10Q9NXR5 420 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 ALKBH4Q9NXW9 302 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 DKKL1Q9UK85 242 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 CEPT1Q9Y6K0 416 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 WDFY3Q8IZQ1 3526 aa18.5■□□□□ 0.55
SMCO4-203ENST00000526869 ARGFXA6NJG6 315 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 SLC22A31A6NKX4 558 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 ZNF701M0R085 212 aaPredicted RBP18.49■□□□□ 0.55
SMCO4-203ENST00000526869 PLPP3O14495 311 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 RAB36O95755 333 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 IGHMP01871 453 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 ACVR2AP27037 513 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 DCKP27707 260 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 SDHAP31040 664 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 MAP2K4P45985 399 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 DNASE1L1P49184 302 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 CTXN1P60606 82 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 ERVK-25P63136 954 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMCO4-203ENST00000526869 ATP1A1-AS1Q5TC04 95 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 AGAP7PQ5VUJ5 663 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 IGFN1Q86VF2 1251 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 FAM98AQ8NCA5 519 aaKnown RBP18.49■□□□□ 0.55
SMCO4-203ENST00000526869 SLC37A3Q8NCC5 494 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 ADPRHL1Q8NDY3 354 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 OR52I1Q8NGK6 324 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 SLC25A36Q96CQ1 311 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 AGAP4Q96P64 663 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 GNRHR2Q96P88 292 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 FAM173AQ9BQD7 235 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 JAM3Q9BX67 310 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 TAS2R5Q9NYW4 299 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 BOKQ9UMX3 212 aaPredicted RBP18.49■□□□□ 0.55
SMCO4-203ENST00000526869 POLHQ9Y253 713 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 EXOGQ9Y2C4 368 aaKnown RBP18.49■□□□□ 0.55
SMCO4-203ENST00000526869 HDGFL3Q9Y3E1 203 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 ADAM18Q9Y3Q7 739 aa18.49■□□□□ 0.55
SMCO4-203ENST00000526869 A0A0G2JMM0 328 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 A0A1W2PPB8 328 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 A0A1W2PRS3 328 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 NPIPB13A6NJU9 1138 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 LRRC3CA6NJW4 275 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 LIPT2A6NK58 231 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 FAM183AA6NL82 134 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 KIR3DP1A8MWS1 328 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 SHISA8B8ZZ34 492 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 NPIPB4C9JG80 1138 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 G3V3Y1 287 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 M0R082 166 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 NKX2-8O15522 239 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 ZIC3O60481 467 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 OR6A2O95222 327 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 TFPIP10646 304 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 HIST1H1CP16403 213 aaKnown RBP18.48■□□□□ 0.55
SMCO4-203ENST00000526869 SLC2A5P22732 501 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 GTF2E2P29084 291 aaKnown RBP18.48■□□□□ 0.55
SMCO4-203ENST00000526869 GP2P55259 537 aaKnown RBP18.48■□□□□ 0.55
SMCO4-203ENST00000526869 MFAP5Q13361 173 aa18.48■□□□□ 0.55
SMCO4-203ENST00000526869 SLC6A19Q695T7 634 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms