RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 A0A0B4J2E0 115 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 A0A1B0GX12 115 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 MRASO14807 208 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 AIM2O14862 343 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 LGI1O95970 557 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 FOSL1P15407 271 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 MPGP29372 298 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 MDH1P40925 334 aaKnown RBP18.16■□□□□ 0.5
VPS28-206ENST00000526734 RPS5P46782 204 aaKnown RBP18.16■□□□□ 0.5
VPS28-206ENST00000526734 OR1Q1Q15612 314 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 VMACQ2NL98 169 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 NANOGP8Q6NSW7 305 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 ERICH5Q6P6B1 374 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 ZNF613Q6PF04 617 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 KLHL17Q6TDP4 642 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 PRSS57Q6UWY2 283 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 P3H2Q8IVL5 708 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 ZIC4Q8N9L1 334 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 ADPRHL1Q8NDY3 354 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 OR10A6Q8NH74 314 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 TMEM171Q8WVE6 324 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 SLC25A36Q96CQ1 311 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 LRRC58Q96CX6 371 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 RADILQ96JH8 1075 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 ARHGDIGQ99819 225 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 CXorf56Q9H5V9 222 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 NANOGQ9H9S0 305 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 GID8Q9NWU2 228 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 RCE1Q9Y256 329 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 B3GALT5Q9Y2C3 310 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 AMDHD2Q9Y303 409 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 CORINQ9Y5Q5 1042 aa18.16■□□□□ 0.5
VPS28-206ENST00000526734 MAGED1Q9Y5V3 778 aaPredicted RBP18.16■□□□□ 0.5
VPS28-206ENST00000526734 TEP1Q99973 2627 aaKnown RBP18.16■□□□□ 0.5
VPS28-206ENST00000526734 ITPR3Q14573 2671 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 M0QX08 132 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 ITGA5P08648 1049 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 PAX7P23759 505 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 BSPH1Q075Z2 132 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 GABRA6Q16445 453 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 NRF1Q16656 503 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 TSPO2Q5TGU0 170 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 REP15Q6BDI9 236 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 TMEM108Q6UXF1 575 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 CREB3L2Q70SY1 520 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 CCDC80Q76M96 950 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 SMYD1Q8NB12 490 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 SLC26A7Q8TE54 656 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 IGFBPL1Q8WX77 278 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 AKAP1Q92667 903 aaKnown RBP eCLIP18.15■□□□□ 0.5
VPS28-206ENST00000526734 FBXW5Q969U6 566 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 KTI12Q96EK9 354 aaPredicted RBP18.15■□□□□ 0.5
VPS28-206ENST00000526734 BOD1Q96IK1 185 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 ZNF385AQ96PM9 386 aaKnown RBP18.15■□□□□ 0.5
VPS28-206ENST00000526734 ECSITQ9BQ95 431 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 TMEM43Q9BTV4 400 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 GSX2Q9BZM3 304 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 MGAT4BQ9UQ53 548 aa18.15■□□□□ 0.5
VPS28-206ENST00000526734 RAI1Q7Z5J4 1906 aaPredicted RBP18.14■□□□□ 0.49
VPS28-206ENST00000526734 LOC102725191A0A1B0GVB3 256 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 FXYD1O00168 92 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 CLOCKO15516 846 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 AKAP8O43823 692 aaKnown RBP18.14■□□□□ 0.49
VPS28-206ENST00000526734 PLAUP00749 431 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 PAX1P15863 534 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 ZNF43P17038 809 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 GZMMP51124 257 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 FOXD4Q12950 439 aaPredicted RBP18.14■□□□□ 0.49
VPS28-206ENST00000526734 VEZF1Q14119 521 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 SNX32Q86XE0 403 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 OXGR1Q96P68 337 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 MCHR1Q99705 422 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 LINC00470Q9BZP3 86 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 OBP2BQ9NPH6 170 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 AP3M1Q9Y2T2 418 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 SLC25A15Q9Y619 301 aa18.14■□□□□ 0.49
VPS28-206ENST00000526734 IGKV1D-42A0A075B6H8 117 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 DPRXA6NFQ7 191 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 KRT33AO76009 404 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 IFNA14P01570 189 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 OPN1SWP03999 348 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 PTAFRP25105 342 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 DUSP7Q16829 419 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 ZNF672Q499Z4 452 aaPredicted RBP18.13■□□□□ 0.49
VPS28-206ENST00000526734 KLHL24Q6TFL4 600 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 H1FNTQ75WM6 255 aaPredicted RBP18.13■□□□□ 0.49
VPS28-206ENST00000526734 ARPINQ7Z6K5 226 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 CALHM3Q86XJ0 350 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 EPHX4Q8IUS5 362 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 SCAIQ8N9R8 606 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 ANKK1Q8NFD2 765 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 GPR32P1Q8NGA4 272 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 RNF217Q8TC41 542 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 TAAR8Q969N4 342 aa18.13■□□□□ 0.49
VPS28-206ENST00000526734 ZNF317Q96PQ6 595 aaPredicted RBP18.13■□□□□ 0.49
VPS28-206ENST00000526734 ZNF587BE7ETH6 402 aa18.12■□□□□ 0.49
VPS28-206ENST00000526734 M0R082 166 aa18.12■□□□□ 0.49
VPS28-206ENST00000526734 M0R3H8 397 aa18.12■□□□□ 0.49
VPS28-206ENST00000526734 CHP2O43745 196 aa18.12■□□□□ 0.49
VPS28-206ENST00000526734 CCDC22O60826 627 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms