RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 ACER1Q8TDN7 264 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 RLN3Q8WXF3 142 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 EMG1Q92979 244 aaKnown RBP2.62□□□□□ -1.99
CD44-215ENST00000525241 TM4SF19Q96DZ7 209 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 ITCHQ96J02 903 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 OXGR1Q96P68 337 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 ZNF607Q96SK3 696 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 SECISBP2Q96T21 854 aaKnown RBP2.62□□□□□ -1.99
CD44-215ENST00000525241 TMEM246Q9BRR3 403 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 RNF167Q9H6Y7 350 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 PATZ1Q9HBE1 687 aaKnown RBP2.62□□□□□ -1.99
CD44-215ENST00000525241 SMOXQ9NWM0 555 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 THUMPD1Q9NXG2 353 aaKnown RBP2.62□□□□□ -1.99
CD44-215ENST00000525241 QPCTLQ9NXS2 382 aa2.62□□□□□ -1.99
CD44-215ENST00000525241 RBAKQ9NYW8 714 aaPredicted RBP2.62□□□□□ -1.99
CD44-215ENST00000525241 A0A096LNJ9 63 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 PRKAB2O43741 272 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 ADRB3P13945 408 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 POU2F1P14859 743 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 DESP17661 470 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 QARSP47897 775 aaKnown RBP2.61□□□□□ -1.99
CD44-215ENST00000525241 GPM6AP51674 278 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 HERVK_113P61574 105 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 PAX5Q02548 391 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 KLRB1Q12918 225 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 OXA1LQ15070 435 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 DPYSL2Q16555 572 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 MARCH8Q5T0T0 291 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 FRMPD2BQ6IN97 320 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 HSDL2Q6YN16 418 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 Q6ZN92 141 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 C6orf120Q7Z4R8 191 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 CCDC65Q8IXS2 484 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 GMCL1P1Q8NEA9 526 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 UBE2E3Q969T4 207 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 STARD4Q96DR4 205 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 SLC17A9Q9BYT1 436 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 ACTR6Q9GZN1 396 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 DEFB127Q9H1M4 99 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 SLC25A37Q9NYZ2 338 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 STOX2Q9P2F5 926 aaPredicted RBP2.61□□□□□ -1.99
CD44-215ENST00000525241 CGNQ9P2M7 1197 aaKnown RBP2.61□□□□□ -1.99
CD44-215ENST00000525241 SEC14L3Q9UDX4 400 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 SH3BGRL2Q9UJC5 107 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 TRAPPC4Q9Y296 219 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 MAP3K15Q6ZN16 1313 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 FRMPD3Q5JV73 1810 aa2.61□□□□□ -1.99
CD44-215ENST00000525241 PDS5BQ9NTI5 1447 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 ARHGAP21Q5T5U3 1957 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 IGLV4-69A0A075B6H9 119 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 TCRBV9S1A1TA0A576 114 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 LAD1O00515 517 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 DFNA5O60443 496 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 ATP5LO75964 103 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 HMGB2P26583 209 aaKnown RBP2.6□□□□□ -1.99
CD44-215ENST00000525241 KIAA0087Q14695 138 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 DUSP7Q16829 419 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 PIGGQ5H8A4 983 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 ZFP2Q6ZN57 461 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
CD44-215ENST00000525241 LINC01551Q86U37 167 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 FAM133AQ8N9E0 248 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 DUSP18Q8NEJ0 188 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 OR52H1Q8NGJ2 320 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 MAIP1Q8WWC4 291 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 GIMAP1Q8WWP7 306 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 TTC25Q96NG3 672 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 TSGA13Q96PP4 275 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 PELOQ9BRX2 385 aaKnown RBP2.6□□□□□ -1.99
CD44-215ENST00000525241 HDHD3Q9BSH5 251 aaPredicted RBP2.6□□□□□ -1.99
CD44-215ENST00000525241 SRMSQ9H3Y6 488 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 SIAEQ9HAT2 523 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 DMAP1Q9NPF5 467 aaPredicted RBP2.6□□□□□ -1.99
CD44-215ENST00000525241 PSG11Q9UQ72 335 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 ATP6V0A2Q9Y487 856 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 SLC25A15Q9Y619 301 aa2.6□□□□□ -1.99
CD44-215ENST00000525241 IGKV2D-24A0A075B6R9 120 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 KIR2DL5BA0A0G2JN68 375 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 KIR2DL5BA0A0G2JPC4 375 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 RBMY1BA6NDE4 496 aaKnown RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 RBMY1EA6NEQ0 496 aaKnown RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 HSD17B6O14756 317 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 RAMP3O60896 148 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 DIRAS1O95057 198 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 RBMY1DP0C7P1 496 aaKnown RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 RBMY1A1P0DJD3 496 aaKnown RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 CCDC130P13994 396 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 GNA11P29992 359 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 HOXA9P31269 272 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 RPL13AP40429 203 aaKnown RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 GSSP48637 474 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 NMUP48645 174 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 CRYBB1P53674 252 aaPredicted RBP2.59□□□□□ -1.99
CD44-215ENST00000525241 SFT2D3Q587I9 215 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 LRRC10Q5BKY1 277 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 DMRTC1Q5HYR2 192 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 C1orf94Q6P1W5 598 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 NLRP9Q7RTR0 991 aa2.59□□□□□ -1.99
CD44-215ENST00000525241 VSTM4Q8IW00 320 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms