RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MFSD8Q8NHS3 518 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 SIKE1Q9BRV8 207 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 PRR14Q9BWN1 585 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 SLCO5A1Q9H2Y9 848 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 PIF1Q9H611 641 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF385DQ9H6B1 395 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
CAPN1-203ENST00000525013 SELENONQ9NZV5 590 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 ANGPT4Q9Y264 503 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 RASD1Q9Y272 281 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 SHISA9B4DS77 424 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 M0R1B8 84 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 PDLIM1O00151 329 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 DANCRP0C864 163 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 PAX1P15863 534 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 MPGP29372 298 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 P2RY4P51582 365 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 EGR4Q05215 589 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 ALG10BQ5I7T1 473 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 CLEC9AQ6UXN8 241 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 CREB3L2Q70SY1 520 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 RETREG3Q86VR2 466 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 CIARTQ8N365 385 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-203ENST00000525013 DPP10Q8N608 796 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 POMGNT2Q8NAT1 580 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 C11orf65Q8NCR3 313 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 DNAJA4Q8WW22 397 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-203ENST00000525013 KTI12Q96EK9 354 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-203ENST00000525013 ANKRD27Q96NW4 1050 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 CGREF1Q99674 301 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 POU2F3Q9UKI9 436 aa16.3■□□□□ 0.2
CAPN1-203ENST00000525013 MAGED1Q9Y5V3 778 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-203ENST00000525013 FTCDNL1E5RQL4 147 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 PNMTP11086 282 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 PTAFRP25105 342 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 MTPNP58546 118 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 NFYCQ13952 458 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 SELPLGQ14242 412 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 PGGHGQ32M88 737 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 SLC22A25Q6T423 547 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 KLHL24Q6TFL4 600 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 C6orf89Q6UWU4 347 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 ABHD12BQ7Z5M8 362 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-203ENST00000525013 KDM8Q8N371 416 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 LSMEM1Q8N8F7 131 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 WDR31Q8NA23 367 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 C1orf162Q8NEQ5 155 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-203ENST00000525013 BHLHE22Q8NFJ8 381 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-203ENST00000525013 TRMT61AQ96FX7 289 aaKnown RBP16.29■□□□□ 0.2
CAPN1-203ENST00000525013 RADILQ96JH8 1075 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 COX4I2Q96KJ9 171 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 PTDSS2Q9BVG9 487 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 ALG2Q9H553 416 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 C12orf10Q9HB07 376 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 TMEM27Q9HBJ8 222 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 SLC17A5Q9NRA2 495 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 FAIMQ9NVQ4 179 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 MGAT4BQ9UQ53 548 aa16.29■□□□□ 0.2
CAPN1-203ENST00000525013 CD40P25942 277 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 CDKN1AP38936 164 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 SELENOPP49908 381 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 IL1RL1Q01638 556 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 LGALS3BPQ08380 585 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 DMTNQ08495 405 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 SPOCK1Q08629 439 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 SF3A3Q12874 501 aaKnown RBP eCLIP16.28■□□□□ 0.21e-9■■■■□ 21.3
CAPN1-203ENST00000525013 METTL21CQ5VZV1 264 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 NIPAL3Q6P499 406 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 ULK3Q6PHR2 472 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 PTOV1Q86YD1 416 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 EPHX4Q8IUS5 362 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 DEPDC4Q8N2C3 294 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 C17orf78Q8N4C9 275 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 SMYD1Q8NB12 490 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 TSPEARQ8WU66 669 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 SLC38A4Q969I6 547 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 TAAR8Q969N4 342 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 SLC47A1Q96FL8 570 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 TMEM120AQ9BXJ8 343 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 AMBRA1Q9C0C7 1298 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 SEC14L4Q9UDX3 406 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 TESQ9UGI8 421 aaKnown RBP16.28■□□□□ 0.2
CAPN1-203ENST00000525013 AMDHD2Q9Y303 409 aa16.28■□□□□ 0.2
CAPN1-203ENST00000525013 FAM171A2A8MVW0 826 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF587BE7ETH6 402 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 OVOL3O00110 214 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 OR2T1O43869 369 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 MFN2O95140 757 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 TROVE2P10155 538 aaKnown RBP eCLIP16.27■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF43P17038 809 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 PTNP21246 168 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 CBLP22681 906 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 GRPRP30550 384 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 CLDN17P56750 224 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 PRPS1P60891 318 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 LTBQ06643 244 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 RBBP4Q09028 425 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 C1DQ13901 141 aaKnown RBP16.27■□□□□ 0.2
CAPN1-203ENST00000525013 OR1Q1Q15612 314 aa16.27■□□□□ 0.2
CAPN1-203ENST00000525013 FAM69AQ5T7M9 428 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms