RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 POTEKPQ9BYX7 375 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 KLHL4Q9C0H6 718 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 ENKD1Q9H0I2 346 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 LRMDAQ9H2I8 198 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 CHST11Q9NPF2 352 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 KCNJ16Q9NPI9 418 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 TIGARQ9NQ88 270 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 NPDC1Q9NQX5 325 aaPredicted RBP4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 MED29Q9NX70 200 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 GALNT8Q9NY28 637 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 PLEKHB1Q9UF11 243 aaPredicted RBP4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 HDGFL3Q9Y3E1 203 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 FAM32AQ9Y421 112 aaKnown RBP4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF175Q9Y473 711 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 COL6A6A6NMZ7 2263 aa4.09□□□□□ -1.76
CHMP4A-202ENST00000524955 TLN1Q9Y490 2541 aaKnown RBP4.09□□□□□ -1.76
CHMP4A-202ENST00000524955 DHRS12A0PJE2 317 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 AQP7P3A6NL99 342 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 EFCAB9A8MZ26 197 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TNFRSF11BO00300 401 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PLPP3O14495 311 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 GNGT2O14610 69 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CDC42EP2O14613 210 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 DVL2O14641 736 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 IMPA2O14732 288 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 RNF13O43567 381 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 FKBP6O75344 327 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CIB2O75838 187 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ATP5HO75947 161 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 LYZL6O75951 148 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SEC14L2O76054 403 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ADAP00813 363 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CST1P01037 141 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CGAP01215 116 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 YES1P07947 543 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 IGFBP1P08833 259 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 HOXD4P09016 255 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ADORA3P0DMS8 318 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SAGP10523 405 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 FCGR2AP12318 317 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF26P17031 533 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 RHCEP18577 417 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 OPRM1P35372 400 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CLK1P49759 484 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SELENOPP49908 381 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 RASSF2P50749 326 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC35A1P78382 337 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 H3F3AP84243 136 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 MYBPC1Q00872 1141 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CHRNB3Q05901 458 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 RPL18Q07020 188 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TFF3Q07654 80 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 FAPQ12884 760 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TRAP1Q12931 704 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CAMK2DQ13557 499 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 C1DQ13901 141 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC17A1Q14916 467 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 RNPS1Q15287 305 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SF3B4Q15427 424 aaKnown RBP eCLIP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 GUSBP1Q15486 140 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF74Q16587 644 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 FAM98BQ52LJ0 330 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEM201Q5SNT2 666 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PHYHD1Q5SRE7 291 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TSPO2Q5TGU0 170 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 OTPQ5XKR4 325 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 OR2A2Q6IF42 318 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 NIPAL3Q6P499 406 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 XKRXQ6PP77 449 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PAQR6Q6TCH4 344 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 C22orf34Q6ZV56 151 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 H1FNTQ75WM6 255 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 RRM2BQ7LG56 351 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 AAED1Q7RTV5 226 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 MAMDC2Q7Z304 686 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 AMIGO2Q86SJ2 522 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CXorf67Q86X51 503 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF100Q8IYN0 542 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 OFCC1Q8IZS5 231 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ARHGAP24Q8N264 748 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF808Q8N4W9 903 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 CLDN22Q8N7P3 220 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ZIC4Q8N9L1 334 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PIK3C3Q8NEB9 887 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 OR4K5Q8NGD3 323 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 OR9K2Q8NGE7 335 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 MFSD8Q8NHS3 518 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PIGXQ8TBF5 258 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ASB5Q8WWX0 329 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PYDC1Q8WXC3 89 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ACOT11Q8WXI4 607 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC35B4Q969S0 331 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 GTPBP3Q969Y2 492 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 BPIFA2Q96DR5 249 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SGTBQ96EQ0 304 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ZC3HAV1LQ96H79 300 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 GMPPAQ96IJ6 420 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms