RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	TRAV1-2	A0A0B4J238	106 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033		A0A0G2JN53	185 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033		A0A1W2PNU3	283 aa	Predicted RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	UNC119B	A6NIH7	251 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ZSCAN5B	A6NJL1	495 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	SLC9B1P1	A6NJY1	282 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033		E9PI62	339 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	PGRMC2	O15173	223 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TPD52L2	O43399	206 aa	Known RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR1F1	O43749	312 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TNFSF15	O95150	251 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	UBL3	O95164	117 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	MPC2	O95563	127 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	CH25H	O95992	272 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	HOXC4	P09017	264 aa	Predicted RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TYRP1	P17643	537 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	CSNK2A2	P19784	350 aa	Predicted RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	HIST1H1T	P22492	207 aa	Predicted RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	F8A1	P23610	371 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	AHR	P35869	848 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TSFM	P43897	325 aa	Known RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	INPP1	P49441	399 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TMPRSS3	P57727	454 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	RGS8	P57771	180 aa	Predicted RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR10A3	P58181	314 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ZP1	P60852	638 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	PRR5	P85299	388 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	PRDX1	Q06830	199 aa	Known RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	BAMBI	Q13145	260 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	CAMK2D	Q13557	499 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	DYRK1A	Q13627	763 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	GSG1	Q2KHT4	349 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	CLEC12A	Q5QGZ9	265 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	IDNK	Q5T6J7	187 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	GARNL3	Q5VVW2	1013 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	MFSD12	Q6NUT3	480 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	IGF2-AS	Q6U949	168 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	IL20RB	Q6UXL0	311 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	WDR88	Q6ZMY6	472 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	HDDC2	Q7Z4H3	204 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TAF8	Q7Z7C8	310 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	AMZ2	Q86W34	360 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	AMIGO1	Q86WK6	493 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	LRRC17	Q8N6Y2	441 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ZNF680	Q8NEM1	530 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	NUP43	Q8NFH3	380 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR6C4	Q8NGE1	309 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR2A1	Q8NGT9	310 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TRMT10A	Q8TBZ6	339 aa	Known RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	FANK1	Q8TC84	345 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	SLC2A12	Q8TD20	617 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TMEM255B	Q8WV15	326 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ZFPM2	Q8WW38	1151 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	KCNE4	Q8WWG9	221 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ELP4	Q96EB1	424 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	RADIL	Q96JH8	1075 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	CMTM3	Q96MX0	182 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	WDR92	Q96MX6	357 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	YIPF4	Q9BSR8	244 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	HCAR1	Q9BXC0	346 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TEX12	Q9BXU0	123 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ACTRT3	Q9BYD9	372 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TWSG1	Q9GZX9	223 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	HDHD2	Q9H0R4	259 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	MRPL18	Q9H0U6	180 aa	Known RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ABCG5	Q9H222	651 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR52D1	Q9H346	318 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	NARFL	Q9H6Q4	476 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	SYNPO2L	Q9H987	977 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ASCL3	Q9NQ33	180 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	TRIM36	Q9NQ86	728 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	DLL4	Q9NR61	685 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	CMC2	Q9NRP2	79 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	LYAR	Q9NX58	379 aa	Known RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	HAO2	Q9NYQ3	351 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	COPZ2	Q9P299	210 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	PTGFRN	Q9P2B2	879 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	RABL2A	Q9UBK7	228 aa	Predicted RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	MGAT4A	Q9UM21	535 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ICAM5	Q9UMF0	924 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ING4	Q9UNL4	249 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	RABL2B	Q9UNT1	228 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	RASD1	Q9Y272	281 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ATG4B	Q9Y4P1	393 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	ENTPD2	Q9Y5L3	495 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	NPFFR2	Q9Y5X5	522 aa		7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	SETX	Q7Z333	2677 aa	Known RBP	7.17	□□□□□ -1.26
SPIDR-223	ENST00000524033	APC2	O95996	2303 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	TEX13C	A0A0J9YWL9	993 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	LOC100289279	A0A1B0GTE1	492 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	ZC3H12D	A2A288	527 aa	Known RBP	7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	GSAP	A4D1B5	854 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	NTN3	O00634	580 aa	Predicted RBP	7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	GPR171	O14626	319 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	TNFRSF10C	O14798	259 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	OGG1	O15527	345 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	EEF1E1	O43324	174 aa	Known RBP	7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	FMO6P	O60774	539 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	ADAM11	O75078	769 aa		7.16	□□□□□ -1.26
SPIDR-223	ENST00000524033	FZD7	O75084	574 aa		7.16	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms