RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 ARMC6Q6NXE6 501 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-228ENST00000524023 TAF8Q7Z7C8 310 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 MCATQ8IVS2 390 aaKnown RBP10.13□□□□□ -0.79
HDAC9-228ENST00000524023 BCORP1Q8N888 145 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 AVL9Q8NBF6 648 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 C7orf57Q8NEG2 295 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 C16orf52Q8NHV5 167 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 RPLP0P6Q8NHW5 317 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 GIMAP1Q8WWP7 306 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 UCKL1Q9NWZ5 548 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 PTTG3PQ9NZH4 202 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 RABL2AQ9UBK7 228 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-228ENST00000524023 RABL2BQ9UNT1 228 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF281Q9Y2X9 895 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 CLDN16Q9Y5I7 305 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 OR2W5A6NFC9 320 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ACOD1A6NK06 481 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 AIPO00170 330 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF593O00488 134 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PDCD5O14737 125 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 GLCEO94923 617 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SEMA4FO95754 770 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SULT1A3P0DMM9 295 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SULT1A4P0DMN0 295 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SDHBP21912 280 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 OR3A3P47888 321 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 P2RX3P56373 397 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PER3P56645 1201 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 NANOS3P60323 173 aaKnown RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PRPS1P60891 318 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 BTG2P78543 158 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 MRPS21P82921 87 aaKnown RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 HHEXQ03014 270 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 EIF2B5Q13144 721 aaKnown RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 IL10RAQ13651 578 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PRTGQ2VWP7 1150 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 LINC01590Q5TEZ4 76 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 LUZP2Q86TE4 346 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 C19orf47Q8N9M1 422 aaKnown RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF527Q8NB42 609 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 OR8H1Q8NGG4 311 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 OR56B4Q8NH76 319 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 MOSPD2Q8NHP6 518 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 TTC9Q92623 222 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 DGAT2Q96PD7 388 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 GPX7Q96SL4 187 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SLC19A3Q9BZV2 496 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ACTR6Q9GZN1 396 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SLC25A18Q9H1K4 315 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 OR10A5Q9H207 317 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PRTFDC1Q9NRG1 225 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF275Q9NSD4 429 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ERVK-19Q9WJR5 959 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 MRPS33Q9Y291 106 aaKnown RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 OR10H1Q9Y4A9 318 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 IGKV1D-42A0A075B6H8 117 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 MEIKINA0A087WXM9 373 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 A0A1B0GTQ1 180 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 A0A1B0GVT2 93 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 TCRBV21S2A2A0A5A6 115 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 IFITM5A6NNB3 132 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PRR32B1ATL7 298 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PSMD9O00233 223 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 GPR171O14626 319 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 DRD1P21728 446 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 DPP4P27487 766 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 GRPRP30550 384 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 CDKN2AP42771 156 aaKnown RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 MAGEB1P43366 347 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PGDP52209 483 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 MAT1AQ00266 395 aaKnown RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF684Q5T5D7 378 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 LEG1Q6P5S2 330 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 LINGO2Q7L985 606 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 FGD2Q7Z6J4 655 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SLC35F3Q8IY50 421 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF595Q8IYB9 648 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 BEST4Q8NFU0 473 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 C17orf50Q8WW18 174 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 RGP1Q92546 391 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 HGDQ93099 445 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 SLC25A38Q96DW6 304 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ALG12Q9BV10 488 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 S1PR5Q9H228 398 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 PLEKHA1Q9HB21 404 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 B3GNT2Q9NY97 397 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 WSB2Q9NYS7 404 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 ELF5Q9UKW6 265 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-228ENST00000524023 RNF215Q9Y6U7 377 aa10.12□□□□□ -0.79
HDAC9-228ENST00000524023 A0A1B0GVI7 797 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 C4orf47A7E2U8 309 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 FAM171A2A8MVW0 826 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 PRAMEF26H0Y7S4 382 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 NOS1APO75052 506 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 SERPINI2O75830 405 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ZFPL1O95159 310 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 IGHV4-34P06331 123 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms