RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 EPHX4Q8IUS5 362 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 VPS37AQ8NEZ2 397 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 SEMA6DQ8NFY4 1073 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 ZIM3Q96PE6 472 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 AKTIPQ9H8T0 292 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 ADPRHL2Q9NX46 363 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 PCDHB14Q9Y5E9 798 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 VAMP5O95183 116 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 ERCC1P07992 297 aaPredicted RBP19.66■□□□□ 0.74
PVT1-218ENST00000523328 UQCRBP14927 111 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 BNIP2Q12982 314 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 SPANXN4Q5MJ08 99 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 NIPAL3Q6P499 406 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 SPATA21Q7Z572 469 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 RNF130Q86XS8 419 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 EIF1ADQ8N9N8 165 aaKnown RBP19.66■□□□□ 0.74
PVT1-218ENST00000523328 UBASH3BQ8TF42 649 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 PPP1R36Q96LQ0 422 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 LINC00470Q9BZP3 86 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 MTHFD2LQ9H903 347 aaPredicted RBP19.66■□□□□ 0.74
PVT1-218ENST00000523328 MOV10Q9HCE1 1003 aaKnown RBP19.66■□□□□ 0.74
PVT1-218ENST00000523328 METRNQ9UJH8 293 aa19.66■□□□□ 0.74
PVT1-218ENST00000523328 A0A0A6YYJ9 748 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 TLDC2A0PJX2 215 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 OR6C65A6NJZ3 312 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 SLCO1B7G3V0H7 640 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 FRS3O43559 492 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 BPGMP07738 259 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 NUDT17P0C025 328 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 HOXB1P14653 301 aaPredicted RBP19.65■□□□□ 0.74
PVT1-218ENST00000523328 IFNGR1P15260 489 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 CBR1P16152 277 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 IL7RP16871 459 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 CCNIQ14094 377 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 ADRM1Q16186 407 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 PDCD2Q16342 344 aaPredicted RBP19.65■□□□□ 0.74
PVT1-218ENST00000523328 UGT2A3Q6UWM9 527 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 DEF8Q6ZN54 512 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 CDK20Q8IZL9 346 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 ZFAND2BQ8WV99 257 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 ANKRD27Q96NW4 1050 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 TAPBPLQ9BX59 468 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 OCEL1Q9H607 264 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 RLIMQ9NVW2 624 aa19.65■□□□□ 0.74
PVT1-218ENST00000523328 IGHV2OR16-5A0A0B4J2B6 119 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 SH3PXD2BA1X283 911 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 TMEM229AB2RXF0 380 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 LYNX1G3V0Z9 82 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 GKN3PP0CG01 181 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 LYNX1P0DP58 116 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 ACAA2P42765 397 aaKnown RBP19.64■□□□□ 0.73
PVT1-218ENST00000523328 SH3BGRP55822 239 aaPredicted RBP19.64■□□□□ 0.73
PVT1-218ENST00000523328 ROR2Q01974 943 aaKnown RBP19.64■□□□□ 0.73
PVT1-218ENST00000523328 GNA13Q14344 377 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 ZNF440Q8IYI8 595 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 CCDC115Q96NT0 180 aa19.64■□□□□ 0.73
PVT1-218ENST00000523328 METTL17Q9H7H0 456 aaPredicted RBP19.64■□□□□ 0.73
PVT1-218ENST00000523328 CDHR4A6H8M9 788 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 ZNF503-AS2A6NEH8 195 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 A8MVM7 634 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 RPL36A-HNRNPH2H7BZ11 118 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 NPIPB7O75200 414 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 DBIP07108 87 aaKnown RBP19.63■□□□□ 0.73
PVT1-218ENST00000523328 PCMT1P22061 227 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 DPY19L1Q2PZI1 675 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 FAM174BQ3ZCQ3 159 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 C1orf140Q5VVS0 124 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 PRAMEF8Q5VWM4 474 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 PRAMEF7Q5VXH5 474 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 CKAP2Q8WWK9 683 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 DYNLRB1Q9NP97 96 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 BTNL2Q9UIR0 455 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 RASD1Q9Y272 281 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 MGAM2Q2M2H8 2515 aa19.63■□□□□ 0.73
PVT1-218ENST00000523328 VSTM5A8MXK1 200 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 B4DSR2 109 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 ITM2AO43736 263 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 ZNF432O94892 652 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 ADRA2AP08913 450 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 ARF1P84077 181 aaKnown RBP19.62■□□□□ 0.73
PVT1-218ENST00000523328 POU3F1Q03052 451 aaPredicted RBP19.62■□□□□ 0.73
PVT1-218ENST00000523328 MAPK11Q15759 364 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 WBP2NLQ6ICG8 309 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 CADM2Q8N3J6 435 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 ZNF781Q8N8C0 355 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 ANKK1Q8NFD2 765 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 PRDM4Q9UKN5 801 aa19.62■□□□□ 0.73
PVT1-218ENST00000523328 E9PBE3 544 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 TFPTP0C1Z6 253 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 CREB1P16220 341 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 EGR1P18146 543 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 ETV4P43268 484 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 COMPP49747 757 aaPredicted RBP19.61■□□□□ 0.73
PVT1-218ENST00000523328 CLNS1AP54105 237 aaKnown RBP19.61■□□□□ 0.73
PVT1-218ENST00000523328 TXNL4AP83876 142 aaKnown RBP19.61■□□□□ 0.73
PVT1-218ENST00000523328 IL1RL1Q01638 556 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 COX20Q5RI15 118 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 ZNF836Q6ZNA1 936 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 GLCCI1Q86VQ1 547 aa19.61■□□□□ 0.73
PVT1-218ENST00000523328 KDM8Q8N371 416 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms