RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 PIF1Q9H611 641 aa17.27■□□□□ 0.36
CERNA3-201ENST00000521403 TMEM45AQ9NWC5 275 aa17.27■□□□□ 0.36
CERNA3-201ENST00000521403 PRDM4Q9UKN5 801 aa17.27■□□□□ 0.36
CERNA3-201ENST00000521403 MOKQ9UQ07 419 aa17.27■□□□□ 0.36
CERNA3-201ENST00000521403 IFT52Q9Y366 437 aa17.27■□□□□ 0.36
CERNA3-201ENST00000521403 PCDHB14Q9Y5E9 798 aa17.27■□□□□ 0.36
CERNA3-201ENST00000521403 A8MV72 311 aaPredicted RBP17.26■□□□□ 0.35
CERNA3-201ENST00000521403 CLIC1O00299 241 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 VAMP5O95183 116 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 LGI1O95970 557 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 GTF2E2P29084 291 aaKnown RBP17.26■□□□□ 0.35
CERNA3-201ENST00000521403 APOBEC3AP31941 199 aaPredicted RBP17.26■□□□□ 0.35
CERNA3-201ENST00000521403 RGNQ15493 299 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 C1QTNF12Q5T7M4 302 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 HMBOX1Q6NT76 420 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 CXXC5Q7LFL8 322 aaKnown RBP17.26■□□□□ 0.35
CERNA3-201ENST00000521403 FAM168AQ92567 244 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 GTF2H4Q92759 462 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 SLC25A36Q96CQ1 311 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 KCNS3Q9BQ31 491 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 RASD1Q9Y272 281 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 PMF1-BGLAPU3KQ54 211 aa17.26■□□□□ 0.35
CERNA3-201ENST00000521403 COL6A5A8TX70 2615 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 TMEM229AB2RXF0 380 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 C5orf58C9J3I9 102 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 NPIPB7O75200 414 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 RPS5P46782 204 aaKnown RBP17.25■□□□□ 0.35
CERNA3-201ENST00000521403 UBE2NP61088 152 aaKnown RBP17.25■□□□□ 0.35
CERNA3-201ENST00000521403 STX1BP61266 288 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 TMEM249Q2WGJ8 235 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 TBRG1Q3YBR2 411 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 HIPK1Q86Z02 1210 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 EPHX4Q8IUS5 362 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 KDM8Q8N371 416 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 OR1K1Q8NGR3 316 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 STK35Q8TDR2 534 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 TLCD1Q96CP7 247 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 FBXO17Q96EF6 278 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 TNFRSF13CQ96RJ3 184 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 PAIP1Q9H074 479 aaKnown RBP17.25■□□□□ 0.35
CERNA3-201ENST00000521403 RAD21L1Q9H4I0 556 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 TMBIM4Q9HC24 238 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 A4GALTQ9NPC4 353 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 OBP2BQ9NPH6 170 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 USH1CQ9Y6N9 552 aa17.25■□□□□ 0.35
CERNA3-201ENST00000521403 A0A096LNT2 108 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 ELOA3DA6NLF2 546 aaPredicted RBP17.24■□□□□ 0.35
CERNA3-201ENST00000521403 LY6HO94772 140 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 PNMTP11086 282 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 SLC25A16P16260 332 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 EFNA4P52798 201 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 FADDQ13158 208 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 ELOA3BQ3SY89 546 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 C6orf52Q5T4I8 152 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 ELOA3Q8NG57 546 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 MFSD8Q8NHS3 518 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 BBS10Q8TAM1 723 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 SLC38A2Q96QD8 506 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 BCL2L10Q9HD36 194 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 RPS6KB2Q9UBS0 482 aa17.24■□□□□ 0.35
CERNA3-201ENST00000521403 FBN1P35555 2871 aaKnown RBP17.23■□□□□ 0.35
CERNA3-201ENST00000521403 A0A096LPE4 126 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 IGHV1-18A0A0C4DH31 117 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 A0A1W2PPZ6 126 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 OR6C65A6NJZ3 312 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 UPK3AO75631 287 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 TUBA1BP68363 451 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 TUBA4AP68366 448 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 LOXL1Q08397 574 aaPredicted RBP17.23■□□□□ 0.35
CERNA3-201ENST00000521403 CHRFAM7AQ494W8 412 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 EPGNQ6UW88 154 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 TUBA1AQ71U36 451 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 LINGO2Q7L985 606 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 GOLGA6L1Q8N7Z2 621 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 KTI12Q96EK9 354 aaPredicted RBP17.23■□□□□ 0.35
CERNA3-201ENST00000521403 PTDSS2Q9BVG9 487 aa17.23■□□□□ 0.35
CERNA3-201ENST00000521403 FTCDNL1E5RQL4 147 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 NR5A2O00482 541 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 POLR3GO15318 223 aaPredicted RBP17.22■□□□□ 0.35
CERNA3-201ENST00000521403 ERLIN1O75477 346 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 IFNA2P01563 188 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 CRYAAP02489 173 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 CSF3P09919 207 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 ZNF43P17038 809 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 CLDN17P56750 224 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 SNRPD2P62316 118 aaKnown RBP17.22■□□□□ 0.35
CERNA3-201ENST00000521403 ROR2Q01974 943 aaKnown RBP17.22■□□□□ 0.35
CERNA3-201ENST00000521403 EGR4Q05215 589 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 GCNT6Q5T4J0 391 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 PODNL1Q6PEZ8 512 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 NFKBIDQ8NI38 313 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 C10orf105Q8TEF2 133 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 NANOS1Q8WY41 292 aaKnown RBP17.22■□□□□ 0.35
CERNA3-201ENST00000521403 BCL2L2Q92843 193 aaPredicted RBP17.22■□□□□ 0.35
CERNA3-201ENST00000521403 SLC35B4Q969S0 331 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 BOD1Q96IK1 185 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 TCF7L2Q9NQB0 619 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 SEC14L4Q9UDX3 406 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 ARFGEF3Q5TH69 2177 aa17.22■□□□□ 0.35
CERNA3-201ENST00000521403 F12P00748 615 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms