RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MAGEA9P43362 315 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 TPMTP51580 245 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 ATP5IP56385 69 aaPredicted RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 SLC8A3P57103 927 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 OGDHQ02218 1023 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 ENPEPQ07075 957 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 BST2Q10589 180 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 SRSF5Q13243 272 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 AANATQ16613 207 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 DUSP7Q16829 419 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 LRRC36Q1X8D7 754 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 C15orf32Q32M92 178 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 DMRTC1Q5HYR2 192 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 ENPP6Q6UWR7 440 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 C2orf66Q6UXQ4 117 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 Q6ZSR3 168 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 RUFY3Q7L099 469 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 HPS6Q86YV9 775 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 SKA3Q8IX90 412 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 PIANPQ8IYJ0 282 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 C6orf223Q8N319 242 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 MRPS31Q92665 395 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 TIMD4Q96H15 378 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 COPS8Q99627 209 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 RAB34Q9BZG1 259 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 NARFLQ9H6Q4 476 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 SEC14L3Q9UDX4 400 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 SLC7A8Q9UHI5 535 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 MOKQ9UQ07 419 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 PPIAL4AQ9Y536 164 aa2.53□□□□□ -2
HMGN1P28-201ENST00000521340 CHD2O14647 1828 aaKnown RBP2.53□□□□□ -2
HMGN1P28-201ENST00000521340 MED14O60244 1454 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 TSPOAP1O95153 1857 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 RGPD8O14715 1765 aaPredicted RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 UBR1Q8IWV7 1749 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 XRN1Q8IZH2 1706 aaKnown RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CRYBG1Q9Y4K1 1723 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 PPIAL4EA0A075B759 164 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CTAGE15A4D2H0 777 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 BTBD17A6NE02 478 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 E9PBE3 544 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIF2AO00139 706 aaPredicted RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 KLHL41O60662 606 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 HCN1O60741 890 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 N4BP1O75113 896 aaKnown RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 ATP5LO75964 103 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 STAMBPO95630 424 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CGAP01215 116 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 PPIAL4FP0DN26 164 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF43P17038 809 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 NCF2P19878 526 aaPredicted RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 DEKP35659 375 aaKnown RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CRYBB2P43320 205 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 BIDP55957 195 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 PLP1P60201 277 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 DGUOKQ16854 277 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 TRIM16LQ309B1 348 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 NSUN5P1Q3KNT7 163 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR5M10Q6IEU7 315 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CCDC137Q6PK04 289 aaKnown RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 KDM7AQ6ZMT4 941 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 ACOT7LQ6ZUV0 252 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CTAGE6Q86UF2 777 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF677Q86XU0 584 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 SLC35F2Q8IXU6 374 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 ABCA7Q8IZY2 2146 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 BBS5Q8N3I7 341 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 GTPBP8Q8N3Z3 284 aaPredicted RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR52K2Q8NGK3 314 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 FAM222BQ8WU58 562 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 DNAJA4Q8WW22 397 aaPredicted RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 SLC25A38Q96DW6 304 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 RPRD1AQ96P16 312 aaPredicted RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 SIGLEC12Q96PQ1 595 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 MBOAT4Q96T53 435 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 RNF2Q99496 336 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 FMO2Q99518 471 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF184Q99676 751 aaPredicted RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 SLC39A3Q9BRY0 314 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 PKIBQ9C010 78 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 VPS37BQ9H9H4 285 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CUTCQ9NTM9 273 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 APOBEC3BQ9UH17 382 aaKnown RBP2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 CPS1P31327 1500 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 DLC1Q96QB1 1528 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 PTPRMP28827 1452 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 MLH3Q9UHC1 1453 aa2.52□□□□□ -2.01
HMGN1P28-201ENST00000521340 NPATQ14207 1427 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 LTN1O94822 1766 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 POLR3AO14802 1390 aaPredicted RBP2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 LRRK1Q38SD2 2015 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 NOTCH3Q9UM47 2321 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 PHLPP2Q6ZVD8 1323 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 TCRBV9S1A1TA0A576 114 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 FAM47DPA6NHR8 397 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 PCP4L1A6NKN8 68 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
HMGN1P28-201ENST00000521340 KRTAP4-16G5E9R7 235 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms