RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 V9GYY5 206 aaPredicted RBP3.34□□□□□ -1.87
SKP1-208ENST00000521216 EVC2Q86UK5 1308 aa3.34□□□□□ -1.87
SKP1-208ENST00000521216 CDC42BPBQ9Y5S2 1711 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 TRBV6-6A0A0A6YYG2 114 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 F5H6K3 240 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 ARPC3O15145 178 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 HCRTR1O43613 425 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 GMFGO60234 142 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 FAM189A1O60320 539 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 MMP1P03956 469 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 RCC1P18754 421 aaPredicted RBP3.33□□□□□ -1.88
SKP1-208ENST00000521216 PSMD7P51665 324 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 KLRC3Q07444 240 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 C1orf61Q13536 156 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 GRB7Q14451 532 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 PARP15Q460N3 678 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 BOLA3Q53S33 107 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 DMRTC1Q5HYR2 192 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 MARCH8Q5T0T0 291 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 RALGPS2Q86X27 583 aaPredicted RBP3.33□□□□□ -1.88
SKP1-208ENST00000521216 N4BP2L2Q92802 583 aaPredicted RBP3.33□□□□□ -1.88
SKP1-208ENST00000521216 LRRC45Q96CN5 670 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 CMTM7Q96FZ5 175 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 P2RY13Q9BPV8 354 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 NRIP2Q9BQI9 281 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 SLC39A3Q9BRY0 314 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 TCHPQ9BT92 498 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 RAB34Q9BZG1 259 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 SLC25A39Q9BZJ4 359 aaPredicted RBP3.33□□□□□ -1.88
SKP1-208ENST00000521216 ROGDIQ9GZN7 287 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 FAM107BQ9H098 131 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 LRRN3Q9H3W5 708 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 REEP4Q9H6H4 257 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 THUMPD1Q9NXG2 353 aaKnown RBP3.33□□□□□ -1.88
SKP1-208ENST00000521216 PIPOXQ9P0Z9 390 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 CFAP45Q9UL16 551 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 RPL36Q9Y3U8 105 aaKnown RBP3.33□□□□□ -1.88
SKP1-208ENST00000521216 TIMM10BQ9Y5J6 103 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 N6AMT1Q9Y5N5 214 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 UHRF1BP1LA0JNW5 1464 aa3.33□□□□□ -1.88
SKP1-208ENST00000521216 NSG1A0A0A6YYJ2 146 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 GOLGA6L10A6NI86 522 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 FAM166BA8MTA8 275 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 E9PBE3 544 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 CPLX1O14810 134 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 NEMFO60524 1076 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 DIRAS1O95057 198 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 OXSR1O95747 527 aaPredicted RBP3.32□□□□□ -1.88
SKP1-208ENST00000521216 CHTF8P0CG12 524 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 ICAM2P13598 275 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 ABOP16442 354 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 GNA11P29992 359 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 FMO3P31513 532 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 OTX2P32243 289 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 RPL13AP40429 203 aaKnown RBP3.32□□□□□ -1.88
SKP1-208ENST00000521216 MAP3K8P41279 467 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 GLP1RP43220 463 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 IFNAR2P48551 515 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 GSSP48637 474 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 CSNK1DP48730 415 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 EIF4EBP2Q13542 120 aaPredicted RBP3.32□□□□□ -1.88
SKP1-208ENST00000521216 OR52E8Q6IFG1 317 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 C6orf89Q6UWU4 347 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 ACP7Q6ZNF0 438 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 RFLNAQ6ZTI6 216 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 PGAP1Q75T13 922 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 TEX9Q8N6V9 391 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 OR10G3Q8NGC4 313 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 OR6C4Q8NGE1 309 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 OR2T3Q8NH03 318 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 RLN3Q8WXF3 142 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 PIBF1Q8WXW3 757 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 FAM104AQ969W3 186 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 RNF2Q99496 336 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 MRPL45Q9BRJ2 306 aaKnown RBP3.32□□□□□ -1.88
SKP1-208ENST00000521216 VCX3BQ9H321 246 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 RNF167Q9H6Y7 350 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 UFSP2Q9NUQ7 469 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 SMPD3Q9NY59 655 aaPredicted RBP3.32□□□□□ -1.88
SKP1-208ENST00000521216 SEC14L3Q9UDX4 400 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 PRG3Q9Y2Y8 225 aaPredicted RBP3.32□□□□□ -1.88
SKP1-208ENST00000521216 NOSIPQ9Y314 301 aaKnown RBP3.32□□□□□ -1.88
SKP1-208ENST00000521216 PLEKHG2Q9H7P9 1386 aa3.32□□□□□ -1.88
SKP1-208ENST00000521216 LTBP1Q14766 1721 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 BAZ1BQ9UIG0 1483 aaKnown RBP3.31□□□□□ -1.88
SKP1-208ENST00000521216 TMEM94Q12767 1356 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 IQANK1A0A1B0GTG1 560 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 A8MXQ7 604 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 H0YCG3 227 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 AGPAT2O15120 278 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 MED7O43513 233 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 IGHG4P01861 327 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 IVLP07476 585 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 NPR2P20594 1047 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 PCMT1P22061 227 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 KIR2DS4P43632 304 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 CTAG1AP78358 180 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 ZNF763Q0D2J5 394 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 ASPHQ12797 758 aa3.31□□□□□ -1.88
SKP1-208ENST00000521216 ATP6AP1Q15904 470 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms