RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 C1QTNF3-AMACRE9PGA6 284 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PAPLNO95428 1278 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR2T7P0C7T2 308 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 NDUFS1P28331 727 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 LTBQ06643 244 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRAMEF8Q5VWM4 474 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRAMEF7Q5VXH5 474 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PXKQ7Z7A4 578 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 GLB1L2Q8IW92 636 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR52H1Q8NGJ2 320 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR52E1Q8NGJ3 308 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR2T27Q8NH04 317 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 KISS1RQ969F8 398 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 LMLNQ96KR4 655 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 LMF1Q96S06 567 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 MNTQ99583 582 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 TRPV4Q9HBA0 871 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 SPHK1Q9NYA1 384 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PIPOXQ9P0Z9 390 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 APOBEC3BQ9UH17 382 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF281Q9Y2X9 895 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 SPACA6W5XKT8 324 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 F5H0A9 414 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 MTRF1O75570 445 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 RHOP08100 348 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 LUMP51884 338 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 GUCA2AQ02747 115 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 NDUFAF7Q7L592 441 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 JAZF1Q86VZ6 243 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR2AK2Q8NG84 335 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 MKKSQ9NPJ1 570 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 ASF1BQ9NVP2 202 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PCDHGA9Q9Y5G4 932 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 LAMA2P24043 3122 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 A0A1B0GWA3 101 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 TVP23AA6NH52 213 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 TMIGD3P0DMS9 266 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PVALBP20472 110 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 RPS27P42677 84 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 FXYD6P3P58550 94 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 SGCGQ13326 291 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 KCNAB1Q14722 419 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 METRNLQ641Q3 311 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF626Q68DY1 528 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 POMZP3Q6PJE2 187 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF227Q86WZ6 799 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR4C16Q8NGL9 310 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 NXPE3Q969Y0 559 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRSS16Q9NQE7 514 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
TRAPPC9-208ENST00000520857 A0A1W2PPV9 198 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 TMEM72A0PK05 275 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 NDUFB2O95178 105 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 IL9P15248 144 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 GAS6Q14393 721 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 DCAF12L2Q5VW00 463 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 CDH26Q8IXH8 852 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 RNF113BQ8IZP6 322 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR51D1Q8NGF3 324 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ACTR10Q9NZ32 417 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ST6GALNAC2Q9UJ37 374 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 MRPS23Q9Y3D9 190 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 GSTZ1O43708 216 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 B3GALT2O43825 422 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 CDC123O75794 336 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 FGF18O76093 207 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 NDUFB6O95139 128 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 EGFP01133 1207 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF136P52737 540 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ELAVL3Q14576 367 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRAMEF17Q5VTA0 474 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 OTPQ5XKR4 325 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 MUC20Q8N307 709 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 SPICQ8N5J4 248 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR5AK2Q8NH90 309 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 CASTOR1Q8WTX7 329 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 RASD2Q96D21 266 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 TSSK2Q96PF2 358 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 TIMP4Q99727 224 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ULBP3Q9BZM4 244 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ATG5Q9H1Y0 275 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 PHPT1Q9NRX4 125 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR5V1Q9UGF6 321 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF346Q9UL40 294 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 CCSO14618 274 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 IMPA2O14732 288 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 RAB40ALP0C0E4 278 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 DEFB103AP81534 67 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 MESP2Q0VG99 397 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 LEG1Q6P5S2 330 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms