RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SERPINA11Q86U17 422 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 OR9I1Q8NGQ6 314 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 STK35Q8TDR2 534 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 C3orf49Q96BT1 292 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 ARMC7Q9H6L4 198 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 CACYBPQ9HB71 228 aaKnown RBP17.16■□□□□ 0.34
PABPC1-215ENST00000520804 TMEM45AQ9NWC5 275 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 NKIRAS1Q9NYS0 192 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 MOKQ9UQ07 419 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 IFT52Q9Y366 437 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 PMF1-BGLAPU3KQ54 211 aa17.16■□□□□ 0.34
PABPC1-215ENST00000520804 CUBNO60494 3623 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 TMEM229AB2RXF0 380 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 KLF11O14901 512 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 UBDO15205 165 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 EFNA4P52798 201 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 LGALS3BPQ08380 585 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 TBRG1Q3YBR2 411 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 PRAMEF8Q5VWM4 474 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 PRAMEF7Q5VXH5 474 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 PODNL1Q6PEZ8 512 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 EPHX4Q8IUS5 362 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 MIER2Q8N344 545 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 OR1K1Q8NGR3 316 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 FAM168AQ92567 244 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 BCL2L10Q9HD36 194 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 RASD1Q9Y272 281 aa17.15■□□□□ 0.34
PABPC1-215ENST00000520804 IGHV1-18A0A0C4DH31 117 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 OR6C65A6NJZ3 312 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 FTCDNL1E5RQL4 147 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 ZNF587BE7ETH6 402 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 AHSA1O95433 338 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 LGI1O95970 557 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 IFNA2P01563 188 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 CSF3P09919 207 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 NUDT7P0C024 238 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 MAGOHP61326 146 aaKnown RBP17.14■□□□□ 0.33
PABPC1-215ENST00000520804 VLDLRP98155 873 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 SWI5Q1ZZU3 235 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 MST1LQ2TV78 715 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 CHRFAM7AQ494W8 412 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 ZNF311Q5JNZ3 666 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 NIPAL3Q6P499 406 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 MFSD8Q8NHS3 518 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 C10orf105Q8TEF2 133 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 GTF2H4Q92759 462 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 SLC35B4Q969S0 331 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 ALKBH3Q96Q83 286 aaPredicted RBP17.14■□□□□ 0.33
PABPC1-215ENST00000520804 PAIP1Q9H074 479 aaKnown RBP17.14■□□□□ 0.33
PABPC1-215ENST00000520804 A4GALTQ9NPC4 353 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 PCDHB14Q9Y5E9 798 aa17.14■□□□□ 0.33
PABPC1-215ENST00000520804 CLIC1O00299 241 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 F12P00748 615 aaPredicted RBP17.13■□□□□ 0.33
PABPC1-215ENST00000520804 BMP2P12643 396 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 PAX7P23759 505 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 RGNQ15493 299 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 SLC2A7Q6PXP3 512 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 LINGO2Q7L985 606 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 NANOS1Q8WY41 292 aaKnown RBP17.13■□□□□ 0.33
PABPC1-215ENST00000520804 PROX1Q92786 737 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 MAL2Q969L2 176 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 TLCD1Q96CP7 247 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 FBXO17Q96EF6 278 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 SLC38A2Q96QD8 506 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 PTDSS2Q9BVG9 487 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 LINC00470Q9BZP3 86 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 RTTNQ86VV8 2226 aa17.13■□□□□ 0.33
PABPC1-215ENST00000520804 ATRQ13535 2644 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 YLPM1P49750 1951 aaKnown RBP17.12■□□□□ 0.33
PABPC1-215ENST00000520804 ARPC4-TTLL3A0A0A6YYG9 625 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 UPK3AO75631 287 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 LY6HO94772 140 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 PNMTP11086 282 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 HOXB9P17482 250 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-215ENST00000520804 UBE2NP61088 152 aaKnown RBP17.12■□□□□ 0.33
PABPC1-215ENST00000520804 HOXC5Q00444 222 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 EGR4Q05215 589 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 FADDQ13158 208 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 KDM8Q8N371 416 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 BBS10Q8TAM1 723 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 MAGEE2Q8TD90 523 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-215ENST00000520804 BCL2L2Q92843 193 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-215ENST00000520804 SLC25A36Q96CQ1 311 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 ZNF317Q96PQ6 595 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-215ENST00000520804 KATNB1Q9BVA0 655 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 RAD21L1Q9H4I0 556 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 CRNNQ9UBG3 495 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-215ENST00000520804 COL6A5A8TX70 2615 aa17.12■□□□□ 0.33
PABPC1-215ENST00000520804 RPS5P46782 204 aaKnown RBP17.11■□□□□ 0.33
PABPC1-215ENST00000520804 EPGNQ6UW88 154 aa17.11■□□□□ 0.33
PABPC1-215ENST00000520804 C6orf89Q6UWU4 347 aa17.11■□□□□ 0.33
PABPC1-215ENST00000520804 KTI12Q96EK9 354 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-215ENST00000520804 KCNS3Q9BQ31 491 aa17.11■□□□□ 0.33
PABPC1-215ENST00000520804 NELFAQ9H3P2 528 aa17.11■□□□□ 0.33
PABPC1-215ENST00000520804 C12orf10Q9HB07 376 aa17.11■□□□□ 0.33
PABPC1-215ENST00000520804 TMBIM4Q9HC24 238 aa17.11■□□□□ 0.33
PABPC1-215ENST00000520804 USH1CQ9Y6N9 552 aa17.11■□□□□ 0.33
PABPC1-215ENST00000520804 NR5A2O00482 541 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 FZD7O75084 574 aa17.1■□□□□ 0.33
PABPC1-215ENST00000520804 ZNF432O94892 652 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms