RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 FGFBP1Q14512 234 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SLC6A19Q695T7 634 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SFXN4Q6P4A7 337 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 C16orf47Q6ZP98 133 aaPredicted RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 SLC35F3Q8IY50 421 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SPEM1Q8N4L4 309 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 MEIOBQ8N635 442 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 OR7G1Q8NGA0 311 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 OR14A16Q8NHC5 309 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SETD6Q8TBK2 473 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 PTP4A1Q93096 173 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 VSTM2LQ96N03 204 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 CMKLR1Q99788 373 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 BARHL1Q9BZE3 327 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 CHIAQ9BZP6 476 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 DPAGT1Q9H3H5 408 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 CTSFQ9UBX1 484 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 ANKRD33BA6NCL7 494 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 E9PI62 339 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 DOK2O60496 412 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 IGKV1D-16P01601 117 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SNTB2Q13425 540 aaKnown RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 CBFBQ13951 182 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 HYAL4Q2M3T9 481 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 LYPD4Q6UWN0 246 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SLITRK4Q8IW52 837 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 CMIPQ8IY22 773 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 POGLUT1Q8NBL1 392 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 STT3BQ8TCJ2 826 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 KLHL15Q96M94 604 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 RBP7Q96R05 134 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 NUDT9Q9BW91 350 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 INIPQ9NRY2 104 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 C19orf25Q9UFG5 118 aaPredicted RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 SUSD2Q9UGT4 822 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 POLHQ9Y253 713 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 A0A0G2JMP0 313 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 A0A0X1KG70 313 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 VSTM2BA6NLU5 285 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 CASP3P42574 277 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 OC90Q02509 493 aaPredicted RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 P2RY14Q15391 338 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 PRTGQ2VWP7 1150 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 SFRP4Q6FHJ7 346 aaPredicted RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 PAPD4Q6PIY7 484 aaKnown RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 LANCL3Q6ZV70 420 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 ZNF627Q7L945 461 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 OR4M2Q8NGB6 313 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 OR1L3Q8NH93 324 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 INTS14Q96SY0 518 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 PRSS27Q9BQR3 290 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 CACNG6Q9BXT2 260 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 B3GNT4Q9C0J1 378 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 OR11A1Q9GZK7 315 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 MOV10Q9HCE1 1003 aaKnown RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 PAQR5Q9NXK6 330 aaPredicted RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 NCDNQ9UBB6 729 aa9.3□□□□□ -0.92
MCF2-209ENST00000520602 RPH3AQ9Y2J0 694 aaPredicted RBP9.3□□□□□ -0.92
MCF2-209ENST00000520602 RANBP2P49792 3224 aaKnown RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 IGHV1OR21-1A0A087WYE8 117 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 A0A0B4J203 849 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 FAM172BPA6NC97 362 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 ZNF726A6NNF4 738 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 SUSD5O60279 629 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 ADRA2AP08913 450 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 GLB1P16278 677 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 SPI1P17947 270 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 MAPK3P27361 379 aaPredicted RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 DCAF7P61962 342 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 TLE3Q04726 772 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 HBMQ6B0K9 141 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 VASNQ6EMK4 673 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 KCTD18Q6PI47 426 aaPredicted RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 C8orf44Q96CB5 159 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 ITPKCQ96DU7 683 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 FSCN3Q9NQT6 498 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 MYEF2Q9P2K5 600 aaKnown RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 ING1Q9UK53 422 aaPredicted RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 PTPRZ1P23471 2315 aaPredicted RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 NCOR1O75376 2440 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 C5orf42Q9H799 3197 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 A0A1W2PPL8 197 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 RFPL3O75679 317 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 ELK1P19419 428 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 ENDOUP21128 410 aaKnown RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 MELKQ14680 651 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 KCNJ8Q15842 424 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 NKAIN1Q4KMZ8 207 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 TMEM69Q5SWH9 247 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 BCL2L15Q5TBC7 163 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 RPL22L1Q6P5R6 122 aaKnown RBP9.29□□□□□ -0.92
MCF2-209ENST00000520602 DNM1P34Q6PK57 102 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 NPSR1Q6W5P4 371 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 PPP1R3BQ86XI6 285 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 PM20D2Q8IYS1 436 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 OR5L2Q8NGL0 311 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 EVA1AQ9H8M9 152 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 SIAEQ9HAT2 523 aa9.29□□□□□ -0.92
MCF2-209ENST00000520602 NOX4Q9NPH5 578 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms