RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 TCEAL3Q969E4 200 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SLC6A18Q96N87 628 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 MICU1Q9BPX6 476 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 PLA2G12AQ9BZM1 189 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SDK2Q58EX2 2172 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 GOSR2O14653 212 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF217O75362 1048 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 KNG1P01042 644 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 CEACAM5P06731 702 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF16P17020 682 aaPredicted RBP10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SDHBP21912 280 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 HTR1FP30939 366 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 HOXA9P31269 272 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 OTX2P32243 289 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SNRPGP62308 76 aaKnown RBP10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SRYQ05066 204 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 BCL2A1Q16548 175 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 BEX5Q5H9J7 111 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 TMEM164Q5U3C3 297 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 AWAT2Q6E213 333 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 OPALINQ96PE5 141 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 GABARAPL3Q9BY60 117 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 METTL17Q9H7H0 456 aaPredicted RBP10.82□□□□□ -0.68
SYNPO-204ENST00000519664 CUTCQ9NTM9 273 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 MUTYHQ9UIF7 546 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 CHST2Q9Y4C5 530 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 A0A0B4J203 849 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SERINC4A6NH21 518 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 G3V3Y1 287 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SELENOFO60613 162 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 AMY2BP19961 511 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 BTG2P78543 158 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 CAMK2BQ13554 666 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 SLC6A19Q695T7 634 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 CLDN22Q8N7P3 220 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 MAP6Q96JE9 813 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF416Q9BWM5 594 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 NCDNQ9UBB6 729 aa10.82□□□□□ -0.68
SYNPO-204ENST00000519664 IGLV3-16A0A075B6K0 115 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 TMEM269A0A1B0GVZ9 245 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 FABP7O15540 132 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 CLUP10909 449 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 CD6P30203 668 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 RAB5BP61020 215 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 AGERQ15109 404 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 TMEM196Q5HYL7 178 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 WBP2NLQ6ICG8 309 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF547Q8IVP9 402 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 FAM26EQ8N5C1 309 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.81□□□□□ -0.68
SYNPO-204ENST00000519664 TGM6O95932 706 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 TMEM225BP0DP42 221 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 RBMXP38159 391 aaKnown RBP10.81□□□□□ -0.68
SYNPO-204ENST00000519664 CXADRP78310 365 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 FCN2Q15485 313 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 USF2Q15853 346 aaPredicted RBP10.81□□□□□ -0.68
SYNPO-204ENST00000519664 OCLNQ16625 522 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 CHRFAM7AQ494W8 412 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 SLC22A6Q4U2R8 563 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 FAM209AQ5JX71 171 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 TCEAL6Q6IPX3 200 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 SLC51BQ86UW2 128 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 PDZD9Q8IXQ8 264 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 NXF5Q9H1B4 397 aaKnown RBP10.81□□□□□ -0.68
SYNPO-204ENST00000519664 NOX3Q9HBY0 568 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 SLAMF7Q9NQ25 335 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 AKIP1Q9NQ31 210 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 C14orf166Q9Y224 244 aaKnown RBP10.81□□□□□ -0.68
SYNPO-204ENST00000519664 MEMO1Q9Y316 297 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 A3GALT2U3KPV4 340 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 TAF1LQ8IZX4 1826 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 NID1P14543 1247 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 ARSBP15848 533 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 ARHGDIBP52566 201 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 RAB38P57729 211 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 FABP5Q01469 135 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 MELKQ14680 651 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 PRAMEF20Q5VT98 475 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 YIPF6Q96EC8 236 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 CDCA3Q99618 268 aaPredicted RBP10.81□□□□□ -0.68
SYNPO-204ENST00000519664 MCCC2Q9HCC0 563 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 SLC6A5Q9Y345 797 aa10.81□□□□□ -0.68
SYNPO-204ENST00000519664 M0R082 166 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF593O00488 134 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 LINC01565O15544 149 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 PRICKLE3O43900 615 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 GRK5P34947 590 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 GDNFP39905 211 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 AIMP2Q13155 320 aaKnown RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 RTL10Q7L3V2 364 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 GLCCI1Q86VQ1 547 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 LINC00346Q8IVM7 164 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ACBD4Q8NC06 268 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 OR5L2Q8NGL0 311 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF417Q8TAU3 575 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 CDCA4Q9BXL8 241 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 BIN3Q9NQY0 253 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 PLCXD1Q9NUJ7 323 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 KCNE1BA0A087WTH5 132 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 SSX5O60225 188 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms