RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MAGEE2Q8TD90 523 aaPredicted RBP2.96□□□□□ -1.94
SQLE-202ENST00000518604 FAM151AQ8WW52 585 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 PSKH2Q96QS6 385 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 COPS8Q99627 209 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 NPAS2Q99743 824 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 RASL11BQ9BPW5 248 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 MRPL45Q9BRJ2 306 aaKnown RBP2.96□□□□□ -1.94
SQLE-202ENST00000518604 CHRDL1Q9BU40 450 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 ROGDIQ9GZN7 287 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 NXF3Q9H4D5 531 aaKnown RBP2.96□□□□□ -1.94
SQLE-202ENST00000518604 RANBP3Q9H6Z4 567 aaPredicted RBP2.96□□□□□ -1.94
SQLE-202ENST00000518604 NIPAL2Q9H841 368 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 MCCC2Q9HCC0 563 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 GLRX2Q9NS18 164 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 ZNF225Q9UK10 706 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 ADAM28Q9UKQ2 775 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 CACNG2Q9Y698 323 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 KANK1Q14678 1352 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 ATAD2BQ9ULI0 1458 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 NKX2-6A6NCS4 301 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 GOLGA8SH3BPF8 625 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 KLF8O95600 359 aaPredicted RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 OXSR1O95747 527 aaPredicted RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 CHTF8P0CG12 524 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 CRISP2P16562 243 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 CALRP27797 417 aaKnown RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 SH3BGRP55822 239 aaPredicted RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 ACTR1AP61163 376 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 DMRTC1Q5HYR2 192 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 PMF1Q6P1K2 205 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 CASC1Q6TDU7 716 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 Q6ZN92 141 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 SLC26A11Q86WA9 606 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 TRIM69Q86WT6 500 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 ZCCHC7Q8N3Z6 543 aaKnown RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 BHLHE23Q8NDY6 225 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 OR52H1Q8NGJ2 320 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 OR6X1Q8NH79 312 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 SCFD1Q8WVM8 642 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 RPUSD4Q96CM3 377 aaKnown RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 CMTM7Q96FZ5 175 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 ITCHQ96J02 903 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 OXGR1Q96P68 337 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 RIOK2Q9BVS4 552 aaKnown RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 SEC14L3Q9UDX4 400 aa2.95□□□□□ -1.94
SQLE-202ENST00000518604 PRRC2AP48634 2157 aaKnown RBP2.95□□□□□ -1.94
SQLE-202ENST00000518604 HSD17B6O14756 317 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 NBR2O15453 112 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 CA11O75493 328 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 PCMT1P22061 227 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 EPS15P42566 896 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 MAGEA8P43361 318 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 VDAC2P45880 294 aaPredicted RBP2.94□□□□□ -1.94
SQLE-202ENST00000518604 HLCSP50747 726 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 AIF1P55008 147 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 UBE2HP62256 183 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 OGDHQ02218 1023 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 OR5I1Q13606 314 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 GNMTQ14749 295 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 PDZK1Q5T2W1 519 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 CENPPQ6IPU0 288 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 IGFL2Q6UWQ7 119 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 RGS9BPQ6ZS82 235 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 COX15Q7KZN9 410 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 EFL1Q7Z2Z2 1120 aaKnown RBP2.94□□□□□ -1.94
SQLE-202ENST00000518604 PLA2G4DQ86XP0 818 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 NUDCD3Q8IVD9 361 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 ZNF679Q8IYX0 411 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 FNDC5Q8NAU1 212 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 OR10G9Q8NGN4 311 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 ACOT11Q8WXI4 607 aaPredicted RBP2.94□□□□□ -1.94
SQLE-202ENST00000518604 C10orf35Q96D05 121 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 TIMD4Q96H15 378 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 FAM210BQ96KR6 192 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 FCRL1Q96LA6 429 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 MTMR9Q96QG7 549 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 TMEM246Q9BRR3 403 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 NAT9Q9BTE0 207 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 AZI2Q9H6S1 392 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 POLE4Q9NR33 117 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 GIN1Q9NXP7 522 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 KCNIP1Q9NZI2 227 aa2.94□□□□□ -1.94
SQLE-202ENST00000518604 TDRD6O60522 2096 aaKnown RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 NSG1A0A0A6YYJ2 146 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 A0A0G2JN53 185 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 OR5B21A6NL26 309 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 SNTNA6NMZ2 147 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 TRAF3IP2O43734 574 aaPredicted RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 TSPAN12O95859 305 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 OPN1MWP04001 364 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 OPN1MW2P0DN77 364 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 OPN1MW3P0DN78 364 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 TDGF1P13385 188 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 HPGDP15428 266 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 RPS2P15880 293 aaKnown RBP2.93□□□□□ -1.94
SQLE-202ENST00000518604 ABOP16442 354 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 FMO3P31513 532 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 TDGF1P3P51864 188 aa2.93□□□□□ -1.94
SQLE-202ENST00000518604 ERVK-25P63136 954 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms