RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 UGT1A4P22310 534 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 FGF9P31371 208 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 UGT1A3P35503 534 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 CCNHP51946 323 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 OR2B6P58173 313 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 CSNK1G2P78368 415 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 SERTAD2Q14140 314 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 PIGHQ14442 188 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 VAMP3Q15836 100 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 CARD16Q5EG05 197 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 ZNF790Q6PG37 636 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 IFNEQ86WN2 208 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 APOBEC3FQ8IUX4 373 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 APRG1Q8IVJ8 170 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 JAGN1Q8N5M9 183 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 STPG4Q8N801 248 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 TTC29Q8NA56 475 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 SUMF1Q8NBK3 374 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 OR1S2Q8NGQ3 325 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 NUBPLQ8TB37 319 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 ZPLD1Q8TCW7 415 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 UFD1Q92890 307 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 NEIL2Q969S2 332 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 ISOC2Q96AB3 205 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 APH1AQ96BI3 265 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 CCDC124Q96CT7 223 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 CELF6Q96J87 481 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 ZNF514Q96K75 400 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 NAPGQ99747 312 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 ACTR3CQ9C0K3 210 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 NAA50Q9GZZ1 169 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 RNF41Q9H4P4 317 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 UXTQ9UBK9 157 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 MRM2Q9UI43 246 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 LSM7Q9UK45 103 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-202ENST00000517533 TRBV7-9A0A0J9YWB2 115 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 A0A1W2PQ72 361 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 SAGE2PA6NJ88 616 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 IDSB3KWA1 339 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 NDUFAB1O14561 156 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 GOSR2O14653 212 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 TFECO14948 347 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 SNAI2O43623 268 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 PRKYO43930 277 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 EIF4E2O60573 245 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 CDC123O75794 336 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 DCNP07585 359 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 HOXD4P09016 255 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 CD1DP15813 335 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 MGMTP16455 207 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 TCN1P20061 433 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 NPR2P20594 1047 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 CALML3P27482 149 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 PSMB6P28072 239 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 CD40LGP29965 261 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 RPL9P32969 192 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 TIMP3P35625 211 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 VHLP40337 213 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 SLC26A3P40879 764 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 SLC1A1P43005 524 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 DAP3P51398 398 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 PRKXP51817 358 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 KPNA2P52292 529 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 BLVRAP53004 296 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 UBE2G2P60604 165 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 ATP6V0D1P61421 351 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 MRPS22P82650 360 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 ZNF154Q13106 437 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 ZIC1Q15915 447 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 GABRA6Q16445 453 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 DGUOKQ16854 277 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 ECSCRQ19T08 205 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 VWA2Q5GFL6 755 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 SAMD4BQ5PRF9 694 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 DCST2Q5T1A1 773 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 PTRHD1Q6GMV3 140 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 ZNF600Q6ZNG1 722 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 STOX1Q6ZVD7 989 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 GPRIN3Q6ZVF9 776 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 ABHD12BQ7Z5M8 362 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 PTAR1Q7Z6K3 402 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 NUDCD3Q8IVD9 361 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 IQCKQ8N0W5 287 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 C17orf78Q8N4C9 275 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 C9orf106Q8NAJ2 232 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 PRSS33Q8NF86 280 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 OR5T2Q8NGG2 359 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 OR10G8Q8NGN5 311 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 OR9A4Q8NGU2 314 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 LYPD6BQ8NI32 183 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 TM9SF4Q92544 642 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 C9orf72Q96LT7 481 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 TBX15Q96SF7 602 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 ECSITQ9BQ95 431 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 NAT10Q9H0A0 1025 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 NSRP1Q9H0G5 558 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 LIME1Q9H400 295 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 WDR41Q9HAD4 459 aa4.69□□□□□ -1.66
CTNNA1-202ENST00000517533 CD209Q9NNX6 404 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms