RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 C2orf48Q96LS8 159 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 KCNA7Q96RP8 456 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 EPYCQ99645 322 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 DERL2Q9GZP9 239 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 DEFB129Q9H1M3 183 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 NXF3Q9H4D5 531 aaKnown RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 REEP4Q9H6H4 257 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 METTL8Q9H825 291 aaKnown RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 WDR54Q9H977 334 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZBTB20Q9HC78 741 aaPredicted RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ESM1Q9NQ30 184 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 THUMPD1Q9NXG2 353 aaKnown RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 IL37Q9NZH6 218 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 GALPQ9UBC7 116 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 B4GALT7Q9UBV7 327 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF282Q9UDV7 671 aaPredicted RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 C3orf18Q9UK00 162 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 LSM7Q9UK45 103 aaKnown RBP3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMCO1Q9UM00 188 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 VDAC3Q9Y277 283 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 PPP2R2CQ9Y2T4 447 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 INSL5Q9Y5Q6 135 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 USP16Q9Y5T5 823 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 SAR1BQ9Y6B6 198 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 SELENOKQ9Y6D0 94 aa3.39□□□□□ -1.87
RNU4-60P-201ENST00000517239 SMIM35A0A1B0GVV1 85 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMEM213A2RRL7 107 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ASPDHA6ND91 283 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC22A20A6NK97 555 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 PP2D1A8MPX8 630 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CENPBD1B2RD01 187 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 INAFM1C9JVW0 142 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 C11orf98E9PRG8 122 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPP14O95059 124 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 RCBTB2O95199 551 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 PLEKHA8P1O95397 391 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTL6AO96019 429 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 HPP00738 406 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPLP0P05388 317 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 KLK1P06870 262 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 RETP07949 1114 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 HOXB7P09629 217 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC35E2BP0CK96 405 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC2A2P11168 524 aaPredicted RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CTRB1P17538 263 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 HLA-DMAP28067 261 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 MPGP29372 298 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 MAGEA2P43356 314 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZFP36L2P47974 494 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SELENOPP49908 381 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 DAP3P51398 398 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 FUT6P51993 359 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CEBPGP53567 150 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 PEX3P56589 373 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 DGCR2P98153 550 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 INSM1Q01101 510 aaPredicted RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ST3GAL3Q11203 375 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMEM187Q14656 261 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 OXA1LQ15070 435 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CD226Q15762 336 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 UPP1Q16831 310 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 TRMT5Q32P41 509 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 NDUFAF6Q330K2 333 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 EIPR1Q53HC9 387 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 TPRG1LQ5T0D9 272 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CTRB2Q6GPI1 263 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ADNP2Q6IQ32 1131 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 APOBEC3HQ6NTF7 200 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ADAM5Q6NVV9 412 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CERS6Q6ZMG9 384 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 LEKR1Q6ZMV7 388 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 C9orf139Q6ZV77 190 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 TIPARPQ7Z3E1 657 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CMC1Q7Z7K0 106 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC47A2Q86VL8 602 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF843Q8N446 348 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 BPIFB2Q8N4F0 458 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 KIF2BQ8N4N8 673 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC16A11Q8NCK7 471 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR2T33Q8NG76 320 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR4D10Q8NGI6 311 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR4C3Q8NH37 302 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPLP0P6Q8NHW5 317 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 MRAPQ8TCY5 172 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 DNAJB3Q8WWF6 145 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 HPSE2Q8WWQ2 592 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ESR2Q92731 530 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 UFD1Q92890 307 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 NTNG2Q96CW9 530 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 CENPNQ96H22 339 aaPredicted RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 DNAJC1Q96KC8 554 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF75AQ96N20 296 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 RBBP8Q99708 897 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 NKX3-1Q99801 234 aaPredicted RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 MICU1Q9BPX6 476 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC35A5Q9BS91 424 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUSP26Q9BV47 211 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMEM59Q9BXS4 323 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms