RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PRSS54Q6PEW0 395 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 IKBIPQ70UQ0 350 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 SLC16A13Q7RTY0 426 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 MIER3Q7Z3K6 550 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CPLX4Q7Z7G2 160 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 CCDC36Q8IYA8 594 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 EIF4E3Q8N5X7 224 aaKnown RBP-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF713Q8N859 430 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 PAQR8Q8TEZ7 354 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 SPSB1Q96BD6 273 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 AURKBQ96GD4 344 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF488Q96MN9 340 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 HIGD2AQ9BW72 106 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 GTPBP2Q9BX10 602 aaKnown RBP-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 LINC00597Q9H2U6 94 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 PSORS1C2Q9UIG4 136 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 PLA2G4CQ9UP65 541 aa-2.28□□□□□ -2.77
RNU6-539P-201ENST00000516665 MBLAC1A4D2B0 266 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 PSCAO43653 123 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 RNASEH2AO75792 299 aaKnown RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 JCHAINP01591 159 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 OR52Z1P0C646 297 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 ANKRD34CP0C6C1 535 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 EEF1B2P24534 225 aaKnown RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 CXCR2P25025 360 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 TM4SF1P30408 202 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 GRK6P43250 576 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 MRPL12P52815 198 aaKnown RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 ZNF92Q03936 586 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 GABPAQ06546 454 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 EXOSC2Q13868 293 aaKnown RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 LAGE3Q14657 143 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 PGAP1Q75T13 922 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 NET1Q7Z628 596 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 DAZ4Q86SG3 579 aaKnown RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 CCDC146Q8IYE0 955 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 STK40Q8N2I9 435 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 ZNF439Q8NDP4 499 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 OR2G3Q8NGZ4 309 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 RDH11Q8TC12 318 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 ABHD3Q8WU67 409 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 TEKT4Q8WW24 435 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 RRP36Q96EU6 259 aaKnown RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 HIST1H4GQ99525 98 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 PDCD1LG2Q9BQ51 273 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 RAB17Q9H0T7 212 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 PDCL3Q9H2J4 239 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 FN3KQ9H479 309 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 VCPKMTQ9H867 229 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 AKIRIN1Q9H9L7 192 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 DAZ1Q9NQZ3 744 aaKnown RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 PDRG1Q9NUG6 133 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 FETUBQ9UGM5 382 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 KLF13Q9Y2Y9 288 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 PFASO15067 1338 aa-2.29□□□□□ -2.78
RNU6-539P-201ENST00000516665 IGKV1D-8A0A087WSZ0 117 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 IGHV1-3A0A0C4DH29 117 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 A0A1B0GVC2 190 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 A0A1W2PQL4 384 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 hCG_1642624A0A1W2PR95 340 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 TTC26A0AVF1 554 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 GGTLC3B5MD39 225 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 CHUKO15111 745 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 CSH1P0DML2 217 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 CSH2P0DML3 217 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 ZNF708P17019 499 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 CASTP20810 708 aaKnown RBP-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 SOX6P35712 828 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 PITPNBP48739 271 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 BIDP55957 195 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 EPS8Q12929 822 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 TMEM52BQ4KMG9 183 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 CCDC92Q53HC0 331 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 RNASE13Q5GAN3 156 aaKnown RBP-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 PM20D1Q6GTS8 502 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 C11orf71Q6IPW1 123 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 PNCKQ6P2M8 343 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 HACD2Q6Y1H2 254 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 FAM219AQ8IW50 185 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 WDFY1Q8IWB7 410 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 LRRC43Q8N309 656 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 VPS37AQ8NEZ2 397 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 OR10D4PQ8NGN7 298 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 GLYATL1Q969I3 302 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 CYP2S1Q96SQ9 504 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 GAL3ST1Q99999 423 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 P2RY13Q9BPV8 354 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 OR52D1Q9H346 318 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 CTSFQ9UBX1 484 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 DIMT1Q9UNQ2 313 aaKnown RBP-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 EIF3LQ9Y262 564 aaKnown RBP-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 DHRS7Q9Y394 339 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 EXOSC1Q9Y3B2 195 aaKnown RBP-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 V9GY05 133 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 PCDH15Q96QU1 1955 aa-2.3□□□□□ -2.78
RNU6-539P-201ENST00000516665 ACANP16112 2415 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 GRIN2DO15399 1336 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 LOC100509620A0A075B734 347 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 A0A0G2JQZ4 141 aa-2.31□□□□□ -2.78
RNU6-539P-201ENST00000516665 A0A1W2PQ09 198 aa-2.31□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms