RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HOPXQ9BPY8 73 aaPredicted RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 ELAC2Q9BQ52 826 aaKnown RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 WFDC6Q9BQY6 131 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 POLR2J2Q9GZM3 115 aaKnown RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 POLR2J3Q9H1A7 115 aaKnown RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 MYLK2Q9H1R3 596 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 EFCAB1Q9HAE3 211 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 ASB6Q9NWX5 421 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 TAS2R16Q9NYV7 291 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 BAG5Q9UL15 447 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 B3GALT5Q9Y2C3 310 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 LOC102725191A0A1B0GVB3 256 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
CLCN3-210ENST00000515420 GMNCA6NCL1 334 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 M0R3H8 397 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 PDLIM1O00151 329 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 AIM2O14862 343 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 LYZL6O75951 148 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 ATE1O95260 518 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 GGT1P19440 569 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 DRD4P21917 467 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 NTF4P34130 210 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 CDH12P55289 794 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 TAB1Q15750 504 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 OR7E24Q6IFN5 339 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 C8orf82Q6P1X6 216 aaPredicted RBP11.28□□□□□ -0.6
CLCN3-210ENST00000515420 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 ABHD12BQ7Z5M8 362 aaPredicted RBP11.28□□□□□ -0.6
CLCN3-210ENST00000515420 CPLX4Q7Z7G2 160 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 GPAT4Q86UL3 456 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 UBE2J2Q8N2K1 259 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 C17orf78Q8N4C9 275 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 ZIC4Q8N9L1 334 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
CLCN3-210ENST00000515420 OR6T1Q8NGN1 323 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 TAAR8Q969N4 342 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 SLC41A3Q96GZ6 507 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 BOD1Q96IK1 185 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 MPP4Q96JB8 637 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 AMBRA1Q9C0C7 1298 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 LIME1Q9H400 295 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 CELSR1Q9NYQ6 3014 aa11.28□□□□□ -0.6
CLCN3-210ENST00000515420 PRRC2AP48634 2157 aaKnown RBP11.27□□□□□ -0.6
CLCN3-210ENST00000515420 ELOVL7A1L3X0 281 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 TRAPPC13A5PLN9 417 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 OR5H1A6NKK0 313 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 MT-ATP6P00846 226 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 TGFBR3Q03167 851 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 KEAP1Q14145 624 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 NPTX1Q15818 432 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 ENTPD8Q5MY95 495 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 C20orf204Q6ZNR8 217 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 CREB3L2Q70SY1 520 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 H1FNTQ75WM6 255 aaPredicted RBP11.27□□□□□ -0.61
CLCN3-210ENST00000515420 AAED1Q7RTV5 226 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 TREML1Q86YW5 311 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 SLC15A3Q8IY34 581 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 MICU2Q8IYU8 434 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 SCAIQ8N9R8 606 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 ADAMTS16Q8TE57 1224 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 SLC25A36Q96CQ1 311 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 MUCL1Q96DR8 90 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 OXGR1Q96P68 337 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF385AQ96PM9 386 aaKnown RBP11.27□□□□□ -0.61
CLCN3-210ENST00000515420 PRR14Q9BWN1 585 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 SLC19A3Q9BZV2 496 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 SLCO5A1Q9H2Y9 848 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 ESRP2Q9H6T0 727 aaKnown RBP11.27□□□□□ -0.61
CLCN3-210ENST00000515420 CCM2LQ9NUG4 571 aaPredicted RBP11.27□□□□□ -0.61
CLCN3-210ENST00000515420 CMTM6Q9NX76 183 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 UPB1Q9UBR1 384 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 ITGB1BP2Q9UKP3 347 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 PLEKHA6Q9Y2H5 1048 aa11.27□□□□□ -0.61
CLCN3-210ENST00000515420 CCT8L1PA6NM43 557 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 M0R082 166 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
CLCN3-210ENST00000515420 TMCC2O75069 709 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 BGLAPP02818 100 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ITGA5P08648 1049 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF43P17038 809 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 CD53P19397 219 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 MPGP29372 298 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 GRPRP30550 384 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 KDELR2P33947 212 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ART1P52961 327 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 GNGT1P63211 74 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 FAPQ12884 760 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 PPA1Q15181 289 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 TSC22D1Q15714 1073 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 NCMAPQ5T1S8 102 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 TSPO2Q5TGU0 170 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ADAM5Q6NVV9 412 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 SEZ6L2Q6UXD5 910 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms