RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 AQP7P3A6NL99 342 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 M0R082 166 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 SMAD9O15198 467 aaKnown RBP18.77■□□□□ 0.6
LSM6-207ENST00000515311 ADAP00813 363 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 HIST1H2ABP04908 130 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 FCGR2AP12318 317 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 ANXA8P13928 327 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 GSSP48637 474 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 TSPAN31Q12999 210 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 PON3Q15166 354 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 FAHD1Q6P587 224 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 H1FNTQ75WM6 255 aaPredicted RBP18.77■□□□□ 0.6
LSM6-207ENST00000515311 HIST3H2AQ7L7L0 130 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 DOLPP1Q86YN1 238 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 HS3ST5Q8IZT8 346 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 LRRC17Q8N6Y2 441 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 ICA1LQ8NDH6 482 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 OR5J2Q8NH18 312 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 ZNF417Q8TAU3 575 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 HIST1H2ACQ93077 130 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 ZNF587Q96SQ5 575 aaPredicted RBP18.77■□□□□ 0.6
LSM6-207ENST00000515311 CHST11Q9NPF2 352 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 ARHGAP21Q5T5U3 1957 aa18.77■□□□□ 0.59
LSM6-207ENST00000515311 SAC3D1A6NKF1 404 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 CDC42EP2O14613 210 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 AKR7A3O95154 331 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 GASTP01350 101 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 TSPAN19P0C672 248 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 RPS4XP62701 263 aaKnown RBP18.76■□□□□ 0.59
LSM6-207ENST00000515311 OTUD3Q5T2D3 398 aaPredicted RBP18.76■□□□□ 0.59
LSM6-207ENST00000515311 C1orf185Q5T7R7 199 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 NSUN5P2Q63ZY6 315 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 CD300LDQ6UXZ3 194 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 NANOGNBQ7Z5D8 188 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 OAFQ86UD1 273 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 STK32CQ86UX6 486 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 MEX3DQ86XN8 651 aaKnown RBP18.76■□□□□ 0.59
LSM6-207ENST00000515311 EPHX4Q8IUS5 362 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 SLC43A2Q8N370 569 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 TMEM99Q8N816 258 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 RNF128Q8TEB7 428 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 DNAJC9Q8WXX5 260 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 WNT2BQ93097 391 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 TRIB1Q96RU8 372 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 GPA33Q99795 319 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 MAGED1Q9Y5V3 778 aaPredicted RBP18.76■□□□□ 0.59
LSM6-207ENST00000515311 POLEQ07864 2286 aa18.76■□□□□ 0.59
LSM6-207ENST00000515311 VAMP5O95183 116 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 GSTM3P21266 225 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 PRKACGP22612 351 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 UQCRC1P31930 480 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 P2RY4P51582 365 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 CASP6P55212 293 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 COX10Q12887 443 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 PMS2P3Q13401 168 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 ABLIM2Q6H8Q1 611 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 RTL6Q6ICC9 239 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 FCRLAQ7L513 359 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 ATG16L2Q8NAA4 619 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 OR13C2Q8NGS9 318 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 FNDC9Q8TBE3 224 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 CIB1Q99828 191 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 C9orf16Q9BUW7 83 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 ZNF556Q9HAH1 456 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 SEC14L4Q9UDX3 406 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 RASD1Q9Y272 281 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 HIF3AQ9Y2N7 669 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 FAM215AQ9Y5M1 114 aa18.75■□□□□ 0.59
LSM6-207ENST00000515311 LOC102725191A0A1B0GVB3 256 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 A0A1W2PNV4 684 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 UNC119BA6NIH7 251 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 ZNF814B7Z6K7 855 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 PLPP3O14495 311 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 CYTIPO60759 359 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 STSP08842 583 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 CA7P43166 264 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 SLC34A1Q06495 639 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 FHL1Q13642 323 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 RNPS1Q15287 305 aaKnown RBP18.74■□□□□ 0.59
LSM6-207ENST00000515311 RPTNQ6XPR3 784 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 ATCAYQ86WG3 371 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 ROBO4Q8WZ75 1007 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 GTPBP3Q969Y2 492 aaKnown RBP18.74■□□□□ 0.59
LSM6-207ENST00000515311 TM9SF2Q99805 663 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 PRRG4Q9BZD6 226 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 RNF122Q9H9V4 155 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 FANCFQ9NPI8 374 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 KIF17Q9P2E2 1029 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 NKX1-2Q9UD57 310 aaPredicted RBP18.74■□□□□ 0.59
LSM6-207ENST00000515311 TINAGQ9UJW2 476 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 SIGLEC7Q9Y286 467 aa18.74■□□□□ 0.59
LSM6-207ENST00000515311 PHF3Q92576 2039 aaKnown RBP18.74■□□□□ 0.59
LSM6-207ENST00000515311 NBASA2RRP1 2371 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 IGHV3-15A0A0B4J1V0 119 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 MBD3L4A6NDZ8 208 aaPredicted RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 MBD3L3A6NE82 208 aaPredicted RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 MBD3L5A6NJ08 208 aaPredicted RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 CASQ2O14958 399 aaPredicted RBP18.73■□□□□ 0.59
LSM6-207ENST00000515311 AQP8O94778 261 aa18.73■□□□□ 0.59
LSM6-207ENST00000515311 OR6A2O95222 327 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms