RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 FIBINQ8TAL6 211 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 HPSE2Q8WWQ2 592 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 ZIC5Q96T25 663 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 CHRDQ9H2X0 955 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.37□□□□□ -0.43
TCOF1-214ENST00000515035 VDAC3Q9Y277 283 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 PCDHGA5Q9Y5G8 931 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 HTR2CP28335 458 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 UBE2NP61088 152 aaKnown RBP12.37□□□□□ -0.43
TCOF1-214ENST00000515035 SFRP5Q5T4F7 317 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 PRR22Q8IZ63 422 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 ADGRF3Q8IZF5 1079 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 FRMD1Q8N878 549 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 ASB17Q8WXJ9 295 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 RSPRY1Q96DX4 576 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 MACROD1Q9BQ69 325 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 RNF151Q2KHN1 245 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 Q499Y3 187 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF542PQ5EBM4 170 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 FOXJ1Q92949 421 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 MCOLN1Q9GZU1 580 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 WIF1Q9Y5W5 379 aa12.37□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM72A0PK05 275 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 KDM4EB2RXH2 506 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 NSA2O95478 260 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 PMS2P2O95744 297 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 OR2T7P0C7T2 308 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 JMJD7P0C870 316 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 SPI1P17947 270 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ASAH1Q13510 395 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 OR7A5Q15622 319 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 HEPHL1Q6MZM0 1159 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 OR2T27Q8NH04 317 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 OR5B2Q96R09 309 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 NIPSNAP1Q9BPW8 284 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ANKRD19PQ9H560 264 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF286AQ9HBT8 521 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 RGPD1P0DJD0 1748 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 IMPA2O14732 288 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF780AO75290 641 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 SCAF4O95104 1147 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 AKR1C1Q04828 323 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 CLINT1Q14677 625 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 MSMO1Q15800 293 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 NXNL2Q5VZ03 156 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 TBPL2Q6SJ96 375 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 SKA3Q8IX90 412 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 OR56B1Q8NGI3 324 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 GPR174Q9BXC1 333 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF629Q9UEG4 869 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 CA14Q9ULX7 337 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 GAB2Q9UQC2 676 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 KPTNQ9Y664 436 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 PRSS21Q9Y6M0 314 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 RGPD5Q99666 1765 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM189-UBE2V1I3L0A0 370 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 DUX1O43812 170 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF217O75362 1048 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 APEHP13798 732 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 VIPR2P41587 438 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 TRA2BP62995 288 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 FOXB2Q5VYV0 432 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 RDH10Q8IZV5 341 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 OR52I1Q8NGK6 324 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 OR1E3Q8WZA6 343 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 C20orf24Q9BUV8 137 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 SIDT1Q9NXL6 827 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 GDE1Q9NZC3 331 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 KLHL42Q9P2K6 505 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 APOBEC3BQ9UH17 382 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 CLEC2DQ9UHP7 191 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 EXO1Q9UQ84 846 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM212A6NML5 194 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 MPPED1O15442 326 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 IRF2P14316 349 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 JUNDP17535 347 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 CD53P19397 219 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 C5AR1P21730 350 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 CHRNEQ04844 493 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 IAH1Q2TAA2 248 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 CST9Q5W186 159 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 PPP1R35Q8TAP8 253 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 SLC38A5Q8WUX1 472 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 DVL3Q92997 716 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 UBE2FQ969M7 185 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 RAB3CQ96E17 227 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM59Q9BXS4 323 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ERVMER34-1Q9H9K5 563 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 ACSS1Q9NUB1 689 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-214ENST00000515035 SLC39A9Q9NUM3 307 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 GPR34Q9UPC5 381 aa12.36□□□□□ -0.43
TCOF1-214ENST00000515035 LDB3O75112 727 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF44P15621 663 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 XCR1P46094 333 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 KCNJ10P78508 379 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms