RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	PDP1	Q9P0J1	537 aa	Predicted RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KLK13	Q9UKR3	277 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	FLVCR1	Q9Y5Y0	555 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SH3TC1	Q8TE82	1336 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CACNA1F	O60840	1977 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	IGHV3-35	A0A0C4DH35	117 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PRR23D1	E9PI22	279 aa	Predicted RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	GOLGA8T	H3BQL2	631 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PI15	O43692	258 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR2F2	O95006	317 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	C1orf105	O95561	183 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TBX6	O95947	436 aa	Predicted RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ERCC1	P07992	297 aa	Predicted RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR8U8	P0C7N1	319 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	GATA1	P15976	413 aa	Predicted RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	EIF2S2	P20042	333 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	NTS	P30990	170 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	UGT1A3	P35503	534 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR1G1	P47890	313 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SH3BGR	P55822	239 aa	Predicted RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ZFP36L1	Q07352	338 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	BCL2L1	Q07817	233 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	DOC2A	Q14183	400 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TIMM50	Q3ZCQ8	353 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PARP15	Q460N3	678 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	C14orf177	Q52M58	125 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR2B11	Q5JQS5	317 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CEP85L	Q5SZL2	805 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PIP5KL1	Q5T9C9	394 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OLFML2A	Q68BL7	652 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TMEM220	Q6QAJ8	160 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CXCL17	Q6UXB2	119 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SLC25A48	Q6ZT89	311 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	FRA10AC1	Q70Z53	315 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	GABRG1	Q8N1C3	465 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ISG20	Q96AZ6	181 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	FGGY	Q96C11	551 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	P2RY13	Q9BPV8	354 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	MFF	Q9GZY8	342 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	DNTTIP1	Q9H147	329 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TBC1D24	Q9ULP9	559 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	UBQLN1	Q9UMX0	589 aa	Known RBP	3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PRSS21	Q9Y6M0	314 aa		3.84	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TRAV25	A0A0B4J276	109 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	WWP2	O00308	870 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	GOSR2	O14653	212 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	AKR7A2	O43488	359 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	TBL1X	O60907	577 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	ERLIN2	O94905	339 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	KLK3	P07288	261 aa	Predicted RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	GTF2E2	P29084	291 aa	Known RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	NAMPT	P43490	491 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	RPS5	P46782	204 aa	Known RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	CSNK1E	P49674	416 aa	Known RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	EIF3E	P60228	445 aa	Known RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	MRPS22	P82650	360 aa	Known RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	MAB21L1	Q13394	359 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	PRR4	Q16378	134 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	LRRC36	Q1X8D7	754 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	PAGE2B	Q5JRK9	111 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	KLF17	Q5JT82	389 aa	Predicted RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	WDR74	Q6RFH5	385 aa	Predicted RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	STXBP4	Q6ZWJ1	553 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	PLA2G4D	Q86XP0	818 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	FNDC5	Q8NAU1	212 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	OR52I1	Q8NGK6	324 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	NRGN	Q92686	78 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	CMTM7	Q96FZ5	175 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	C20orf96	Q9NUD7	363 aa	Predicted RBP	3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	GIN1	Q9NXP7	522 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	PTTG3P	Q9NZH4	202 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	KLHL21	Q9UJP4	597 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	USP47	Q96K76	1375 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	SNED1	Q8TER0	1413 aa		3.83	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	INSR	P06213	1382 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	CNTNAP2	Q9UHC6	1331 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	IGHV1OR15-1	A0A075B7D0	117 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	IGHV1OR21-1	A0A087WYE8	117 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	LRRIQ3	A6PVS8	624 aa	Predicted RBP	3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	DYNC1I1	O14576	645 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	AIM2	O14862	343 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	EIF3H	O15372	352 aa	Known RBP eCLIP	3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	SOX15	O60248	233 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	C2	P06681	752 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	ANXA5	P08758	320 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	CCDC166	P0CW27	439 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	FOLR2	P14207	255 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	CCNB1	P14635	433 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	CAPN2	P17655	700 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	ATP6V1B2	P21281	511 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	GDF1	P27539	372 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	RFX3	P48380	749 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	RAB10	P61026	200 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	MARCH8	Q5T0T0	291 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	GFI1B	Q5VTD9	330 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	C9orf135	Q5VTT2	229 aa		3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	ZNF772	Q68DY9	489 aa	Predicted RBP	3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006	TWF2	Q6IBS0	349 aa	Known RBP	3.82	□□□□□ -1.8
CALCOCO2-222	ENST00000514006		Q6ZN92	141 aa		3.82	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms