RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 RASD2Q96D21 266 aa7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 ASF1BQ9NVP2 202 aa7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 CPNE7Q9UBL6 633 aa7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 FBXL2Q9UKC9 423 aa7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 DAPP1Q9UN19 280 aa7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 CYP8B1Q9UNU6 501 aa7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 FLVCR2Q9UPI3 526 aa7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 EXO1Q9UQ84 846 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-216ENST00000512820 NUMA1Q14980 2115 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 GABARAPH6UMI1 98 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 SULT1B1O43704 296 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 S100A11P31949 105 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TRHRP34981 398 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 NFATC4Q14934 902 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 PXDC1Q5TGL8 231 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 FBXO42Q6P3S6 717 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 CFAP77Q6ZQR2 320 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 Q6ZSR6 202 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 FBXL6Q8N531 539 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 DEFB119Q8N690 84 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 DAZLQ92904 295 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ZC3H10Q96K80 434 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 PHB2Q99623 299 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 MARVELD1Q9BSK0 173 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 MYO7AQ13402 2215 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TSPAN11A1L157 253 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 SERINC4A6NH21 518 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 KRBOX1C9JBD0 128 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 PLA2G10O15496 165 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 CLUP10909 449 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 HIST1H1CP16403 213 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ENDOUP21128 410 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 PER3P56645 1201 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 RAB38P57729 211 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TAS2R19P59542 299 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 CXADRP78310 365 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 EXOSC2Q13868 293 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 HEPHL1Q6MZM0 1159 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 DPY19L4Q7Z388 723 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TMEM151BQ8IW70 566 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 DNAAF1Q8NEP3 725 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TSTD1Q8NFU3 115 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 OR8D4Q8NGM9 314 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 DIO2Q92813 273 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 RADILQ96JH8 1075 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 STACQ99469 402 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 GPN3Q9UHW5 284 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 SLC16A7O60669 478 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 SCO1O75880 301 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 RBMXP38159 391 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 MVDP53602 400 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ALKBH1Q13686 389 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 SERTAD2Q14140 314 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 RNLSQ5VYX0 342 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TANGO2Q6ICL3 276 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 GPAT4Q86UL3 456 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 CMTM4Q8IZR5 234 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF283Q8N7M2 679 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 DUSP18Q8NEJ0 188 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 STEAP2Q8NFT2 490 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ZBTB8AQ96BR9 441 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 MRGPRX3Q96LB0 322 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ADOQ96SZ5 270 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 FGF22Q9HCT0 170 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 MOKQ9UQ07 419 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 GON4LQ3T8J9 2241 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 M0R036 132 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 WRBO00258 174 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 PVALBP20472 110 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 NUDT1P36639 197 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 PXNP49023 591 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 CAPZA1P52907 286 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 BEX5Q5H9J7 111 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TOR2AQ5JU69 321 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TEX261Q6UWH6 196 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TMPRSS9Q7Z410 1059 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 CD163Q86VB7 1156 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF547Q8IVP9 402 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 EID2Q8N6I1 236 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 ZNF454Q8N9F8 522 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 OR5T3Q8NGG3 340 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 TRMT61AQ96FX7 289 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 JSRP1Q96MG2 331 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 AUNIPQ9H7T9 357 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 FBRSQ9HAH7 460 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 UBQLN4Q9NRR5 601 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 U3KQ87 197 aa7.76□□□□□ -1.17
LIMCH1-216ENST00000512820 PARP14Q460N5 1801 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 hCG_1807616A0A1W2PRN6 198 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 TMEM212A6NML5 194 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 GPR171O14626 319 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 ERCC1P07992 297 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 PET100P0DJ07 73 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 RAB2AP61019 212 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 GALK2Q01415 458 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 TAGLNQ01995 201 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 EEF1A2Q05639 463 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 DYRK1AQ13627 763 aa7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 GLYR1Q49A26 553 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-216ENST00000512820 GPR139Q6DWJ6 353 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms