RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 TWIST2Q8WVJ9 160 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 GATA5Q9BWX5 397 aaPredicted RBP16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 TBK1Q9UHD2 729 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 NBEAL2Q6ZNJ1 2754 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 TRAV20A0A0B4J274 112 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 RNF103-CHMP3A0A140T963 221 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 DUXAA6NLW8 204 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 PEX11AO75192 247 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 RP2O75695 350 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 ABHD2P08910 425 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 HKR1P10072 659 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 CASQ1P31415 396 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 ROR2Q01974 943 aaKnown RBP16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 NPRL3Q12980 569 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 DAG1Q14118 895 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 MAD2L1BPQ15013 274 aaPredicted RBP16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 PDCD2Q16342 344 aaPredicted RBP16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 XKR7Q5GH72 579 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 NIPAL3Q6P499 406 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 TNFAIP8L2Q6P589 184 aaPredicted RBP16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 LRP11Q86VZ4 500 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 C17orf53Q8N3J3 647 aaPredicted RBP16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 MIPOL1Q8TD10 442 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 XAGE5Q8WWM1 108 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 C22orf15Q8WYQ4 148 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 PMM1Q92871 262 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 MRPL24Q96A35 216 aaKnown RBP16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 JMJD8Q96S16 334 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 DUSP26Q9BV47 211 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 SUCNR1Q9BXA5 334 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 REV1Q9UBZ9 1251 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 PPIAL4AQ9Y536 164 aa16.32■□□□□ 0.2
HMGCS1-206ENST00000511774 TMEM114B3SHH9 223 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 SYNGR3O43761 229 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 GLRA3O75311 464 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 CPA3P15088 417 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 ACHEP22303 614 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 RPL3P39023 403 aaKnown RBP16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 HTR3AP46098 478 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 BNIP2Q12982 314 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 FAM153CQ494X1 144 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 MDP1Q86V88 176 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 C10orf107Q8IVU9 208 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 RIBC1Q8N443 379 aaPredicted RBP16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 RDH5Q92781 318 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 TAF15Q92804 592 aaKnown RBP eCLIP16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 ROPN1LQ96C74 230 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 ZNF317Q96PQ6 595 aaPredicted RBP16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 SYT3Q9BQG1 590 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 TSPYL1Q9H0U9 437 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 ATAD3AQ9NVI7 634 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 CMAHPQ9Y471 501 aa16.31■□□□□ 0.2
HMGCS1-206ENST00000511774 SEC14L2O76054 403 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 GPIP06744 558 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 GUSBP08236 651 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 NR4A1P22736 598 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 PAX7P23759 505 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 SLC9B1Q4ZJI4 515 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 C6orf136Q5SQH8 315 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 IL23RQ5VWK5 629 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 OR4F3Q6IEY1 312 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 SYT10Q6XYQ8 523 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 LRRC17Q8N6Y2 441 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 NOA1Q8NC60 698 aaKnown RBP16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 RNF217Q8TC41 542 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 MS4A3Q96HJ5 214 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 PIF1Q9H611 641 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 CRLF2Q9HC73 371 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 EXD2Q9NVH0 621 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 ADPRHL2Q9NX46 363 aa16.3■□□□□ 0.2
HMGCS1-206ENST00000511774 M0R233 179 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 RIPK2O43353 540 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 PPIHO43447 177 aaKnown RBP16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 PLPP2O43688 288 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 DEAF1O75398 565 aaPredicted RBP16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 ZNF432O94892 652 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 FSHBP01225 129 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 HOXB1P14653 301 aaPredicted RBP16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 PCLAFQ15004 111 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 KDM8Q8N371 416 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 OIT3Q8WWZ8 545 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 ZNF75AQ96N20 296 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 LINC00470Q9BZP3 86 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 POLE3Q9NRF9 147 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 PSMC3IPQ9P2W1 217 aaPredicted RBP16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 OPN4Q9UHM6 478 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 FZR1Q9UM11 496 aa16.29■□□□□ 0.2
HMGCS1-206ENST00000511774 VSTM5A8MXK1 200 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 RPL36A-HNRNPH2H7BZ11 118 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 SCN2BO60939 215 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 LYPLA1O75608 230 aaPredicted RBP16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 CHEK2O96017 543 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 FGF4P08620 206 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 ZFP36P26651 326 aaKnown RBP16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 MAPK1P28482 360 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 EVX1P49640 407 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 TMEM33P57088 247 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 MYBPC1Q00872 1141 aa16.28■□□□□ 0.2
HMGCS1-206ENST00000511774 EPS8Q12929 822 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms