RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 NPAP1Q9NZP6 1156 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 FLRT3Q9NZU0 649 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 SENP1Q9P0U3 644 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 RNF14Q9UBS8 474 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 MALT1Q9UDY8 824 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF225Q9UK10 706 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 VDAC3Q9Y277 283 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 AMDHD2Q9Y303 409 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 ALPK2Q86TB3 2170 aa3.79□□□□□ -1.8
CALCOCO2-213ENST00000509112 TRRAPQ9Y4A5 3859 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 A0A096LPK6 155 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 IGHV4-61A0A0C4DH41 118 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 B9A039 149 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 H3BQF6 201 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 MANBAO00462 879 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GPR171O14626 319 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF195O14628 629 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 KCNAB3O43448 404 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 RRP9O43818 475 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 EFNA2O43921 213 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 LYZL6O75951 148 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 URI1O94763 535 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 TGFAP01135 160 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 IGKV1D-16P01601 117 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ENO1P06733 434 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 PRPS2P11908 318 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 PRPH2P23942 346 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 EPHA3P29320 983 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 NTSP30990 170 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GABRA3P34903 492 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 HSD17B3P37058 310 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 FRKP42685 505 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 PPOXP50336 477 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 SERPINB8P50452 374 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 P2RX1P51575 399 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 NCBP2P52298 156 aaKnown RBP eCLIP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CDH15P55291 814 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 NAA20P61599 178 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ACSM2AQ08AH3 577 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF763Q0D2J5 394 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 RASGEF1BQ0VAM2 473 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CALCOCO2Q13137 446 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CCNIQ14094 377 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 TSC22D1Q15714 1073 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 PDCD2Q16342 344 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GABRA6Q16445 453 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 PDLIM3Q53GG5 364 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 FBXW9Q5XUX1 488 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 AP1ARQ63HQ0 302 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ACSM2BQ68CK6 577 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ABLIM2Q6H8Q1 611 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM71E1Q6IPT2 247 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC22A25Q6T423 547 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 B3GLCTQ6Y288 498 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 Q6YL49 198 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 Q6ZNX1 250 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GALNT5Q7Z7M9 940 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 LCA5Q86VQ0 697 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CTAGE3PQ8IX95 158 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC15A3Q8IY34 581 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CNPY4Q8N129 248 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC35F6Q8N357 371 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 MMGT1Q8N4V1 131 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 SPC24Q8NBT2 197 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR4C3Q8NH37 302 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 NEU4Q8WWR8 484 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ASB10Q8WXI3 467 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GIMAP5Q96F15 307 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 AMDHD1Q96NU7 426 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF317Q96PQ6 595 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 BBS4Q96RK4 519 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF382Q96SR6 550 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 STACQ99469 402 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 NPAS1Q99742 590 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 MRPL57Q9BQC6 102 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 AIFM2Q9BRQ8 373 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ERP44Q9BS26 406 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 RBM4Q9BWF3 364 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 FUT8Q9BYC5 575 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GLIPR2Q9H4G4 154 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CXorf36Q9H7Y0 433 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CHODLQ9H9P2 273 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 OBP2BQ9NPH6 170 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 HEYLQ9NQ87 328 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 DUSP22Q9NRW4 184 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 FARSBQ9NSD9 589 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 DDX18Q9NVP1 670 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 TAS2R16Q9NYV7 291 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 CPSF2Q9P2I0 782 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 MID2Q9UJV3 735 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 PRDM4Q9UKN5 801 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 ICAM5Q9UMF0 924 aa3.78□□□□□ -1.8
CALCOCO2-213ENST00000509112 GNG14A0A1W2PPG7 69 aa3.77□□□□□ -1.81
CALCOCO2-213ENST00000509112 GXYLT2A0PJZ3 443 aa3.77□□□□□ -1.81
CALCOCO2-213ENST00000509112 UNC119BA6NIH7 251 aa3.77□□□□□ -1.81
CALCOCO2-213ENST00000509112 ZNF716A6NP11 495 aa3.77□□□□□ -1.81
CALCOCO2-213ENST00000509112 TMEM233B4DJY2 109 aa3.77□□□□□ -1.81
CALCOCO2-213ENST00000509112 NPIPB9F8W1W9 429 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms