RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PEF1Q9UBV8 284 aaKnown RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF221Q9UK13 617 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 RAB22AQ9UL26 194 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 KCNIP3Q9Y2W7 256 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TRAV26-1A0A087WT03 109 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SIRPB1O00241 398 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SH2D1BO14796 132 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ANKRD28O15084 1053 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 INSIG1O15503 277 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 F10P00742 488 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 LCKP06239 509 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 GIFP27352 417 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 HSD11B1P28845 292 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 HTR7P34969 479 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 HSPA9P38646 679 aaKnown RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 NAA10P41227 235 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TNFSF9P41273 254 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ACOT2P49753 483 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 CLDN17P56750 224 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TAS2R41P59536 307 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 POLR2GP62487 172 aaKnown RBP eCLIP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SP3Q02447 781 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 NHLH2Q02577 135 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 CFHR1Q03591 330 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ETFDHQ16134 617 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ZBED5Q49AG3 693 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 PLA2G2CQ5R387 149 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 MEDAGQ5VYS4 303 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 C9orf57Q5W0N0 161 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ITIH5Q86UX2 942 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 C18orf25Q96B23 403 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 MED8Q96G25 268 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SMARCD1Q96GM5 515 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 Q96M66 194 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SLC38A1Q9H2H9 487 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 RAB18Q9NP72 206 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 STUB1Q9UNE7 303 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ALG5Q9Y673 324 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 EVPLQ92817 2033 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 A0A1W2PQF6 199 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM178BH3BS89 294 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 DNASE1L1P49184 302 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 HYAL1Q12794 435 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 PRICKLE4Q2TBC4 344 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 YIF1BQ5BJH7 314 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 EOGTQ5NDL2 527 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF776Q68DI1 518 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-209ENST00000508871 DCUN1D2Q6PH85 259 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 TAC4Q86UU9 113 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 SERINC5Q86VE9 423 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 GLMPQ8WWB7 406 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 UPRTQ96BW1 309 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 PPP1R2P1Q96PQ5 205 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 ALG8Q9BVK2 526 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 PECRQ9BY49 303 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 BCL2L14Q9BZR8 327 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 MOB1AQ9H8S9 216 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 NMRAL1Q9HBL8 299 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 RXFP3Q9NSD7 469 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 ABCC13Q9NSE7 274 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 C2orf42Q9NWW7 574 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 COMMD9Q9P000 198 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 DKK4Q9UBT3 224 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 SH3PXD2BA1X283 911 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 ARL5CA6NH57 179 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 AHRRA9YTQ3 701 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 FCMRO60667 390 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 GLSO94925 669 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-209ENST00000508871 OR4E1P0C645 316 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 CD1DP15813 335 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 FOXN2P32314 431 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 LHX1P48742 406 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 KIR3DS1Q14943 382 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 TP53I3Q53FA7 332 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 RABL3Q5HYI8 236 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 SEM1Q6ZVN7 128 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 GOLGA7Q7Z5G4 137 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 DHDDSQ86SQ9 333 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 IQCKQ8N0W5 287 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 GALNT16Q8N428 558 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 FAM86B1Q8N7N1 296 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 OR13J1Q8NGT2 312 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 GPR148Q8TDV2 347 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 ART4Q93070 314 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 ERGIC1Q969X5 290 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 NUDT11Q96G61 164 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 UCK2Q9BZX2 261 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF430Q9H8G1 570 aaPredicted RBP3.59□□□□□ -1.84
NEDD4-209ENST00000508871 LPAR2Q9HBW0 351 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 LRRC4Q9HBW1 653 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 PADI3Q9ULW8 664 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 GPR132Q9UNW8 380 aa3.59□□□□□ -1.84
NEDD4-209ENST00000508871 A0A1W2PRF3 423 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 A0A1W2PRM7 423 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC17A3O00476 420 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TPST1O60507 370 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 LATS1O95835 1130 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 C6orf47O95873 294 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 ONECUT2O95948 504 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms