RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 GPIP06744 558 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 UQCRBP14927 111 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 CD40P25942 277 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 ACVR1BP36896 505 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 CDH11P55287 796 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 EGR4Q05215 589 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 LRIF1Q5T3J3 769 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 FAM91A1Q658Y4 838 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 C11orf71Q6IPW1 123 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 BLOC1S3Q6QNY0 202 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 TRPM8Q7Z2W7 1104 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
LMNA-222ENST00000508500 OR9K2Q8NGE7 335 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 GRIP2Q9C0E4 1043 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 A4GALTQ9NPC4 353 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 SLC17A5Q9NRA2 495 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 DCTN4Q9UJW0 460 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 B3GALT5Q9Y2C3 310 aa14.22□□□□□ -0.13
LMNA-222ENST00000508500 A0A096LPI6 279 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 TRBV5-3A0A0A0MS03 114 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 A8MVM7 634 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 INAFM1C9JVW0 142 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 FTCDNL1E5RQL4 147 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 RNF223E7ERA6 249 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 PCSK6P29122 969 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 LGALS3BPQ08380 585 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 LARS2Q15031 903 aaKnown RBP14.21□□□□□ -0.13
LMNA-222ENST00000508500 ZNF311Q5JNZ3 666 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 OR7E24Q6IFN5 339 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 LINGO2Q7L985 606 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 SSX8Q7RTT4 187 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 GTPBP3Q969Y2 492 aaKnown RBP14.21□□□□□ -0.13
LMNA-222ENST00000508500 TRMT61AQ96FX7 289 aaKnown RBP14.21□□□□□ -0.13
LMNA-222ENST00000508500 LRRC37BQ96QE4 947 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 PTDSS2Q9BVG9 487 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 SF3B5Q9BWJ5 86 aaKnown RBP14.21□□□□□ -0.13
LMNA-222ENST00000508500 IKZF5Q9H5V7 419 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 PARPBPQ9NWS1 579 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 UPB1Q9UBR1 384 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 PRDM4Q9UKN5 801 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 TRIM33Q9UPN9 1127 aa14.21□□□□□ -0.13
LMNA-222ENST00000508500 ATRQ13535 2644 aa14.21□□□□□ -0.14
LMNA-222ENST00000508500 M0R1B8 84 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 PTAFRP25105 342 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 TTKP33981 857 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 COPZ1P61923 177 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 FADDQ13158 208 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 VEZF1Q14119 521 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 GLIPR1L2Q4G1C9 344 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 PRAMEF8Q5VWM4 474 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 PRAMEF7Q5VXH5 474 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 TMEM108Q6UXF1 575 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 CREB3L2Q70SY1 520 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 AAED1Q7RTV5 226 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 EPHX4Q8IUS5 362 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 PRR14Q9BWN1 585 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 ADPRHL2Q9NX46 363 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 THUMPD1Q9NXG2 353 aaKnown RBP14.2□□□□□ -0.14
LMNA-222ENST00000508500 CCDC167Q9P0B6 97 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 VAPAQ9P0L0 249 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 SEC14L4Q9UDX3 406 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 ZNF232Q9UNY5 417 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 IFT52Q9Y366 437 aa14.2□□□□□ -0.14
LMNA-222ENST00000508500 MXRA5Q9NR99 2828 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 CUBNO60494 3623 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 TPST1O60507 370 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 ATP5HO75947 161 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 ARAFP10398 606 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 NCF2P19878 526 aaPredicted RBP14.19□□□□□ -0.14
LMNA-222ENST00000508500 HTR2AP28223 471 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 MPGP29372 298 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 SELENOPP49908 381 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 ZSWIM7Q19AV6 140 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 SLC22A25Q6T423 547 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 CCDC121Q6ZUS5 278 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 GPAT4Q86UL3 456 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 KDM8Q8N371 416 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 C1orf162Q8NEQ5 155 aaPredicted RBP14.19□□□□□ -0.14
LMNA-222ENST00000508500 NFKBIDQ8NI38 313 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 BBS10Q8TAM1 723 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 STK35Q8TDR2 534 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 SPDL1Q96EA4 605 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 KTI12Q96EK9 354 aaPredicted RBP14.19□□□□□ -0.14
LMNA-222ENST00000508500 BOD1Q96IK1 185 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 RADILQ96JH8 1075 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 DHRS9Q9BPW9 319 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 WFDC6Q9BQY6 131 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 REG4Q9BYZ8 158 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 PIF1Q9H611 641 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 MGAT4BQ9UQ53 548 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 GMEB1Q9Y692 573 aa14.19□□□□□ -0.14
LMNA-222ENST00000508500 MALRD1Q5VYJ5 2156 aa14.18□□□□□ -0.14
LMNA-222ENST00000508500 NR5A2O00482 541 aa14.18□□□□□ -0.14
LMNA-222ENST00000508500 SLC22A2O15244 555 aa14.18□□□□□ -0.14
LMNA-222ENST00000508500 FZD7O75084 574 aa14.18□□□□□ -0.14
LMNA-222ENST00000508500 ETS2P15036 469 aa14.18□□□□□ -0.14
LMNA-222ENST00000508500 STX1BP61266 288 aa14.18□□□□□ -0.14
LMNA-222ENST00000508500 ETFDHQ16134 617 aa14.18□□□□□ -0.14
LMNA-222ENST00000508500 HIKESHIQ53FT3 197 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms