RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 C17orf67Q0P5P2 114 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 MAD2L1Q13257 205 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 GPR68Q15743 365 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 CD226Q15762 336 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 TOMM34Q15785 309 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 HSPB2Q16082 182 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 MAPK14Q16539 360 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SMU1Q2TAY7 513 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 FAM174BQ3ZCQ3 159 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 VPS26BQ4G0F5 336 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 KLHL26Q53HC5 615 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 NHSL2Q5HYW2 709 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 DCST2Q5T1A1 773 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.06□□□□□ -1.76
NUP54-206ENST00000508465 RIPPLY2Q5TAB7 128 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 RAET1LQ5VY80 246 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 NSUN5P2Q63ZY6 315 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 TNFAIP8L2Q6P589 184 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 TMEM81Q6P7N7 255 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ZCCHC12Q6PEW1 402 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ZNF621Q6ZSS3 439 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 IFNEQ86WN2 208 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PM20D2Q8IYS1 436 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 GCNT2Q8N0V5 402 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 EID3Q8N140 333 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ZNF614Q8N883 585 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 FADS6Q8N9I5 356 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ZBTB8BQ8NAP8 495 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 RFWD2Q8NHY2 731 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PSMA8Q8TAA3 256 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PNPT1Q8TCS8 783 aaKnown RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 RNF138Q8WVD3 245 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 FIG4Q92562 907 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 R3HDM4Q96D70 268 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ATP6V1G3Q96LB4 118 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SFXN2Q96NB2 322 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 OR52E6Q96RD3 313 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SDF2Q99470 211 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PTDSS2Q9BVG9 487 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 OR51I1Q9H343 314 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PIGUQ9H490 435 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 TMEM185BQ9H7F4 350 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 CALHM2Q9HA72 323 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 UBQLN4Q9NRR5 601 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SLC6A13Q9NSD5 602 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 AIG1Q9NVV5 245 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ASIC5Q9NY37 505 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 MKLN1Q9UL63 735 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 CLEC4AQ9UMR7 237 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PCDHGB4Q9UN71 923 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PROCRQ9UNN8 238 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 CARD8Q9Y2G2 431 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 MRPS18CQ9Y3D5 142 aaKnown RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 USH1CQ9Y6N9 552 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 NCOA6Q14686 2063 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 ABCA12Q86UK0 2595 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 OTOGQ6ZRI0 2925 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 PKDREJQ9NTG1 2253 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 IGLV3-32A0A0A0MS00 114 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 A0A0J9YW62 118 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 TTC36A6NLP5 189 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 CLDN24A6NM45 220 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 TRPC5OSA6NMA1 111 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 EEF1E1-BLOC1S5C9J1V9 151 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 SYT5O00445 386 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 UBDO15205 165 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 EEF1E1O43324 174 aaKnown RBP4.05□□□□□ -1.76
NUP54-206ENST00000508465 BCAS1O75363 584 aaPredicted RBP4.05□□□□□ -1.76
NUP54-206ENST00000508465 NUDT14O95848 222 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 TMIGD3P0DMS9 266 aaPredicted RBP4.05□□□□□ -1.76
NUP54-206ENST00000508465 T-ENOLP0DO92 83 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 PEPDP12955 493 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 H2AFXP16104 143 aaPredicted RBP4.05□□□□□ -1.76
NUP54-206ENST00000508465 DDX5P17844 614 aaKnown RBP4.05□□□□□ -1.76
NUP54-206ENST00000508465 UQCRC2P22695 453 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 CHMP24386 653 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 MT3P25713 68 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 SHC1P29353 583 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 SFTPDP35247 375 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 GCKP35557 465 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 TIMP3P35625 211 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 ZNF136P52737 540 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 SLC18A1P54219 525 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 ATP12AP54707 1039 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 PSMD4P55036 377 aaKnown RBP4.05□□□□□ -1.76
NUP54-206ENST00000508465 CLDN18P56856 261 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 SIRPAP78324 504 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 ZNF117Q03924 483 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 TLE4Q04727 773 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 MYBPHQ13203 477 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 RCAN2Q14206 197 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 BCL2A1Q16548 175 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 SYPL1Q16563 259 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 TMEM44Q2T9K0 475 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 PDZK1Q5T2W1 519 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 ANXA8L1Q5VT79 327 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 AAGABQ6PD74 315 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 CBLN3Q6UW01 205 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 EPGNQ6UW88 154 aa4.05□□□□□ -1.76
NUP54-206ENST00000508465 ENPP6Q6UWR7 440 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms