RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RPL3P39023 403 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 TTPAP49638 278 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 NDUFA6P56556 154 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 IRF8Q02556 426 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 SRSF4Q08170 494 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 ZNF616Q08AN1 781 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 SLC10A7Q0GE19 358 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 ABRAXAS2Q15018 415 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 TAF9Q16594 264 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 PLAC9Q5JTB6 97 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 HENMT1Q5T8I9 393 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 TXNRD3NBQ6F5E7 133 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 KIRREL2Q6UWL6 708 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 TTC9BQ8N6N2 239 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 SAMD12Q8N8I0 201 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 FBXL13Q8NEE6 735 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 OR14L1PQ8NHC6 308 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 RNF141Q8WVD5 230 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 TMEM40Q8WWA1 233 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 TMEM234Q8WY98 164 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 OR8D1Q8WZ84 308 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 PSMG2Q969U7 264 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 FOXN4Q96NZ1 517 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 WDR18Q9BV38 432 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 SLITRK2Q9H156 845 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 RHOJQ9H4E5 214 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 ASF1BQ9NVP2 202 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 OBP2AQ9NY56 170 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 LRP2BPQ9P2M1 347 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 HSPB7Q9UBY9 170 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 KCNE5Q9UJ90 142 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 UTS2RQ9UKP6 389 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 PADI1Q9ULC6 663 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 SF3B6Q9Y3B4 125 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 MAP4K5Q9Y4K4 846 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 PHLPP1O60346 1717 aa9.98□□□□□ -0.81
PDLIM5-210ENST00000508216 A0A087X1B8 175 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 hCG_1809904A0A1W2PP81 198 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 A0A1W2PQ45 241 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 A0A1W2PQY0 241 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 A0A1W2PR64 198 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 A0A1W2PRV1 198 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 C7orf77A4D0Y5 90 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 C2orf78A6NCI8 922 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 GGT3PA6NGU5 568 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 A6NNC1 897 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 A8MVM7 634 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 MAGEB4O15481 346 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 CYB5BO43169 146 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 MED7O43513 233 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 KCNQ2O43526 872 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 NARSO43776 548 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 ADAP1O75689 374 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 RHBDL1O75783 438 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 SOD2P04179 222 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 CKMP06732 381 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 UCHL1P09936 223 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 SLC25A4P12235 298 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 ZNF7P17097 686 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 PSMB1P20618 241 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 CD1CP29017 333 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 AKT2P31751 481 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 MTNR1BP49286 362 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 PITPNAQ00169 270 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 KLF9Q13886 244 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 RBM39Q14498 530 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 SLC35G1Q2M3R5 365 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 ZNF613Q6PF04 617 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 UBE2R2Q712K3 238 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 COMMD2Q86X83 199 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 ZDHHC21Q8IVQ6 265 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 H1FOOQ8IZA3 346 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 C1orf87Q8N0U7 546 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 LYG1Q8N1E2 194 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 EID2Q8N6I1 236 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 OR4K2Q8NGD2 314 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 OR51G2Q8NGK0 314 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 CCDC107Q8WV48 283 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 DPF1Q92782 380 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 UBE2FQ969M7 185 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 BPIFA2Q96DR5 249 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 CPNE2Q96FN4 548 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 ZIC5Q96T25 663 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 HIST1H2BLQ99880 126 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 TBL1XR1Q9BZK7 514 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 POMKQ9H5K3 350 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 TMEM38AQ9H6F2 299 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 PLEKHA1Q9HB21 404 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 CA10Q9NS85 328 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 NEUROG3Q9Y4Z2 214 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 GBF1Q92538 1859 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 TECPR2O15040 1411 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 ITGB4P16144 1822 aa9.97□□□□□ -0.81
PDLIM5-210ENST00000508216 LOC105371242A0A075B767 164 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 F5H5P2 479 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 M0R3H8 397 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 SYT7O43581 403 aa9.96□□□□□ -0.81
PDLIM5-210ENST00000508216 CDC40O60508 579 aaKnown RBP eCLIP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms