RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 TLN2Q9Y4G6 2542 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 NIPBLQ6KC79 2804 aaeCLIP12.66□□□□□ -0.385e-7■■□□□ 13.4
HMGCS1-203ENST00000507004 ELOA3DA6NLF2 546 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 EVPLLA8MZ36 301 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 TMEM229AB2RXF0 380 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 E7EQL1 145 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 H7C417 338 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 IGHV4-39P01824 125 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 PCSK6P29122 969 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 APOBEC3AP31941 199 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 FABP6P51161 128 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 NUDT6P53370 316 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 UBE2NP61088 152 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 ELOA3BQ3SY89 546 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 GTDC1Q4AE62 458 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 GCNT6Q5T4J0 391 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 FAM91A1Q658Y4 838 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 REEP3Q6NUK4 255 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 BLOC1S3Q6QNY0 202 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 CLEC2AQ6UVW9 174 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 CREB3L2Q70SY1 520 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 CLIP4Q8N3C7 705 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 LSMEM1Q8N8F7 131 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 WDR31Q8NA23 367 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 ELOA3Q8NG57 546 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 SPDL1Q96EA4 605 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 DNAJA3Q96EY1 480 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 AURKBQ96GD4 344 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 KCNS3Q9BQ31 491 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 SELENONQ9NZV5 590 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 SLC13A4Q9UKG4 626 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 B3GALT5Q9Y2C3 310 aa12.65□□□□□ -0.38
HMGCS1-203ENST00000507004 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 VSTM5A8MXK1 200 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 FZD7O75084 574 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 SERPINB7O75635 380 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ARAFP10398 606 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ZNF43P17038 809 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ACVR1BP36896 505 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 NCALDP61601 193 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 RPS26P11Q5JNZ5 115 aaPredicted RBP12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 FAM69AQ5T7M9 428 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 C11orf71Q6IPW1 123 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 HMBOX1Q6NT76 420 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 DHRS4L2Q6PKH6 230 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC2A7Q6PXP3 512 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 SERPINA11Q86U17 422 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 FAM169BQ8N8A8 192 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ZIC4Q8N9L1 334 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 OR6S1Q8NH40 331 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 DYDC1Q8WWB3 177 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ZNF385AQ96PM9 386 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ZNF607Q96SK3 696 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 EPYCQ99645 322 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 CACNG6Q9BXT2 260 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 TMEM38AQ9H6F2 299 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 TESQ9UGI8 421 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ATP23Q9Y6H3 246 aa12.64□□□□□ -0.39
HMGCS1-203ENST00000507004 ARPC4-TTLL3A0A0A6YYG9 625 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 INAFM1C9JVW0 142 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 FTCDNL1E5RQL4 147 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 AIM2O14862 343 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 CRLF1O75462 422 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 PDE5AO76074 875 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 CRYAAP02489 173 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC25A16P16260 332 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC6A2P23975 617 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 IDH3AP50213 366 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 P2RY4P51582 365 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 CDK6Q00534 326 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 SQLEQ14534 574 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 ULK3Q6PHR2 472 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 ADPRHL1Q8NDY3 354 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 ZBTB9Q96C00 473 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC47A1Q96FL8 570 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 ATP6V1G3Q96LB4 118 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 OXGR1Q96P68 337 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 KATNB1Q9BVA0 655 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 TMEM27Q9HBJ8 222 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 MRGBPQ9NV56 204 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 CCDC167Q9P0B6 97 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 CHST2Q9Y4C5 530 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 CORINQ9Y5Q5 1042 aa12.63□□□□□ -0.39
HMGCS1-203ENST00000507004 ABCA1O95477 2261 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 RPL36A-HNRNPH2H7BZ11 118 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 CD5LO43866 347 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 SSX4O60224 188 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC43A1O75387 559 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 PRG2P13727 222 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 HOXB9P17482 250 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 GPX2P18283 190 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 FOXG1P55316 489 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 RBBP4Q09028 425 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 BNIP2Q12982 314 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 C1DQ13901 141 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms