RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 NEBLO76041 1014 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 B3GAT3O94766 335 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 CLUP10909 449 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 CSRP1P21291 193 aaKnown RBP4.41□□□□□ -1.7
HERC4-213ENST00000506515 PAX7P23759 505 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
HERC4-213ENST00000506515 VLDLRP98155 873 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 PJVKQ0ZLH3 352 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 HTR4Q13639 388 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 PPM1LQ5SGD2 360 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 FAM228AQ86W67 206 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 ZDHHC21Q8IVQ6 265 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 ZBED8Q8IZ13 594 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 ABCA7Q8IZY2 2146 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 OR2T34Q8NGX1 318 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 CCDC12Q8WUD4 166 aaPredicted RBP4.41□□□□□ -1.7
HERC4-213ENST00000506515 IL1F10Q8WWZ1 152 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 OSTF1Q92882 214 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 PSMG2Q969U7 264 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 MYLPFQ96A32 169 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 ELSPBP1Q96BH3 223 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 VSIG2Q96IQ7 327 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 VPS39Q96JC1 886 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 SERAC1Q96JX3 654 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 DPH7Q9BTV6 452 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 SPZ1Q9BXG8 430 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 DEFB126Q9BYW3 111 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 MEAF6Q9HAF1 191 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 ZFP14Q9HCL3 533 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 GSTK1Q9Y2Q3 226 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 MMP24Q9Y5R2 645 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 ZFHX4Q86UP3 3567 aa4.4□□□□□ -1.7
HERC4-213ENST00000506515 FLNBO75369 2602 aaKnown RBP4.4□□□□□ -1.7
HERC4-213ENST00000506515 ANGPT2O15123 496 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 SCRG1O75711 98 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 F10P00742 488 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 KRT8P05787 483 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 GIG44P09565 113 aaPredicted RBP4.4□□□□□ -1.71
HERC4-213ENST00000506515 HNRNPA2B1P22626 353 aaKnown RBP4.4□□□□□ -1.71
HERC4-213ENST00000506515 PSMA5P28066 241 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 DHPSP49366 369 aaPredicted RBP4.4□□□□□ -1.71
HERC4-213ENST00000506515 EWSR1Q01844 656 aaKnown RBP eCLIP4.4□□□□□ -1.71
HERC4-213ENST00000506515 PVRIGQ6DKI7 326 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 CES3Q6UWW8 571 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 CADM2Q8N3J6 435 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 DENND6BQ8NEG7 585 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 FAM3CQ92520 227 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 FGF13Q92913 245 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 RAB33BQ9H082 229 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 LY9Q9HBG7 655 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 ZNF275Q9NSD4 429 aaPredicted RBP4.4□□□□□ -1.71
HERC4-213ENST00000506515 PAK1IP1Q9NWT1 392 aaPredicted RBP4.4□□□□□ -1.71
HERC4-213ENST00000506515 SNX6Q9UNH7 406 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 NEUROG3Q9Y4Z2 214 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 PPIAL4AQ9Y536 164 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 PCNX2A6NKB5 2137 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 ATG2AQ2TAZ0 1938 aa4.4□□□□□ -1.71
HERC4-213ENST00000506515 BAZ2BQ9UIF8 2168 aaKnown RBP4.4□□□□□ -1.71
HERC4-213ENST00000506515 USP24Q9UPU5 2620 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 IGLV3-10A0A075B6K4 115 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 FAM168BA1KXE4 195 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 PPIAL4DF5H284 164 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 XPO1O14980 1071 aaKnown RBP4.39□□□□□ -1.71
HERC4-213ENST00000506515 PSMC3P17980 439 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 GNA11P29992 359 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 OR1G1P47890 313 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 RPL32P62910 135 aaKnown RBP4.39□□□□□ -1.71
HERC4-213ENST00000506515 CLLU1OSQ5K130 101 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 CASC1Q6TDU7 716 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 OTUD6AQ7L8S5 288 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 APTXQ7Z2E3 356 aaKnown RBP4.39□□□□□ -1.71
HERC4-213ENST00000506515 SERPINA9Q86WD7 417 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 ZNF525Q8N782 197 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 TTC25Q96NG3 672 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 PAXXQ9BUH6 204 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 OR10H1Q9Y4A9 318 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 SPAG17Q6Q759 2223 aa4.39□□□□□ -1.71
HERC4-213ENST00000506515 SDK1Q7Z5N4 2213 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 DOCK8Q8NF50 2099 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 KIAA1671Q9BY89 1806 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 H3BMQ9 156 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 ZSCAN12O43309 604 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 ZNF254O75437 659 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 ERLIN2O94905 339 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 CCDC166P0CW27 439 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 RPA2P15927 270 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 KLK2P20151 261 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 SLC11A1P49279 550 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 MEOX2P50222 304 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 PLA2G16P53816 162 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 MXD4Q14582 209 aaPredicted RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 PDK4Q16654 411 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 RABGAP1LQ5R372 815 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 UTF1Q5T230 341 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 ZNF658Q5TYW1 1059 aaPredicted RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 ACOT1Q86TX2 421 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 RALGPS2Q86X27 583 aaPredicted RBP4.38□□□□□ -1.71
HERC4-213ENST00000506515 PLA2G4DQ86XP0 818 aa4.38□□□□□ -1.71
HERC4-213ENST00000506515 GPR137CQ8N3F9 429 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms