RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 ZNF426Q9BUY5 554 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 PTDSS2Q9BVG9 487 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 SLC19A3Q9BZV2 496 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 KLHL4Q9C0H6 718 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 CXXC4Q9H2H0 198 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 ANKRD19PQ9H560 264 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 CALHM2Q9HA72 323 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 MAN2C1Q9NTJ4 1040 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 CCM2LQ9NUG4 571 aaPredicted RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 C6orf203Q9P0P8 240 aaPredicted RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 CLCF1Q9UBD9 225 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 MEMO1Q9Y316 297 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 MED31Q9Y3C7 131 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 MPDZO75970 2070 aa8.96□□□□□ -0.97
NUP54-203ENST00000504173 MXRA5Q9NR99 2828 aa8.96□□□□□ -0.97
NUP54-203ENST00000504173 IGHV3-15A0A0B4J1V0 119 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 TRBV4-1A0A0J9YWV2 114 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 A0A1W2PRQ8 180 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 LIPT2A6NK58 231 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 ANKRD65E5RJM6 399 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 DNPH1O43598 174 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 PIP5K1CO60331 668 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 GADD45GO95257 159 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 TGM6O95932 706 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 CST1P01037 141 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 GLI4P10075 376 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 FPR1P21462 350 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 ENPP1P22413 925 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 NUP107P57740 925 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 ACTR3P61158 418 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 LTBQ06643 244 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 DGCR6Q14129 220 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 MFSD13AQ14CX5 517 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 OR2T5Q6IEZ7 315 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 PODNL1Q6PEZ8 512 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 NCCRP1Q6ZVX7 275 aaPredicted RBP8.96□□□□□ -0.98
NUP54-203ENST00000504173 RRM2BQ7LG56 351 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 ADGRE4PQ86SQ3 457 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 OR2T29Q8NH02 315 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 PFN4Q8NHR9 129 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 ROBO4Q8WZ75 1007 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 WNT2BQ93097 391 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 TAAR8Q969N4 342 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 SLCO4A1Q96BD0 722 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 DHRS1Q96LJ7 313 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 UCN2Q96RP3 112 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 DMRTA2Q96SC8 542 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 TM9SF2Q99805 663 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 TTYH2Q9BSA4 534 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 NAA11Q9BSU3 229 aaPredicted RBP8.96□□□□□ -0.98
NUP54-203ENST00000504173 DENND2DQ9H6A0 471 aaPredicted RBP8.96□□□□□ -0.98
NUP54-203ENST00000504173 REEP1Q9H902 201 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 MCCC2Q9HCC0 563 aa8.96□□□□□ -0.98
NUP54-203ENST00000504173 A0A087WUU8 490 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 MBD3L4A6NDZ8 208 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 MBD3L3A6NE82 208 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 MBD3L5A6NJ08 208 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 FTCDNL1E5RQL4 147 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 TNFRSF11BO00300 401 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 GNGT2O14610 69 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 SMAD9O15198 467 aaKnown RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 EIF1BO60739 113 aaKnown RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 TIPRLO75663 272 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 KRT36O76013 467 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 AQP8O94778 261 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 AKR7A3O95154 331 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 CH25HO95992 272 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 MT-ATP6P00846 226 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 IL2RAP01589 272 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 BGLAPP02818 100 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 IFI30P13284 250 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 KLK2P20151 261 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 CBLP22681 906 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 GRPRP30550 384 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 AGFG1P52594 562 aaKnown RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 PMPCAQ10713 525 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 ZNF74Q16587 644 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 EXOC3L2Q2M3D2 409 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 OTUD3Q5T2D3 398 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 RIPPLY2Q5TAB7 128 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 MTFR2Q6P444 385 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 PAQR6Q6TCH4 344 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 SEM1Q6ZVN7 128 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 MBOAT2Q6ZWT7 520 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 ZNF771Q7L3S4 317 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 FCRLAQ7L513 359 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 NRMQ8IXM6 262 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 C10orf67Q8IYJ2 551 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 MARVELD2Q8N4S9 558 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 C9orf106Q8NAJ2 232 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 PAPD5Q8NDF8 572 aaKnown RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 OR6S1Q8NH40 331 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 MBD3L2Q8NHZ7 208 aaPredicted RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 PIGXQ8TBF5 258 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 SLC7A13Q8TCU3 470 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 PYDC1Q8WXC3 89 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 RND1Q92730 232 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 SGTBQ96EQ0 304 aa8.95□□□□□ -0.98
NUP54-203ENST00000504173 DUS3LQ96G46 650 aaKnown RBP8.95□□□□□ -0.98
NUP54-203ENST00000504173 ALPK1Q96QP1 1244 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms