RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 HIGD2BQ4VC39 106 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 TNFAIP8L3Q5GJ75 292 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 SEL1L3Q68CR1 1132 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 ADCK1Q86TW2 530 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 HPS6Q86YV9 775 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 ZBED8Q8IZ13 594 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 TYMSOSQ8TAI1 123 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 FNDC8Q8TC99 324 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 FAM172AQ8WUF8 416 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 CYTH2Q99418 400 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 TMEM121Q9BTD3 319 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 NAT9Q9BTE0 207 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 MED10Q9BTT4 135 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 DUSP16Q9BY84 665 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 NXF3Q9H4D5 531 aaKnown RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 GPN2Q9H9Y4 310 aaPredicted RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 POPDC2Q9HBU9 364 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 MEPEQ9NQ76 525 aaPredicted RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 PSMC3IPQ9P2W1 217 aaPredicted RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 CYTH4Q9UIA0 394 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 XPO7Q9UIA9 1087 aaKnown RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 FAM47DPA6NHR8 397 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 SMIM23A6NLE4 172 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 LRRC30A6NM36 301 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 E7ESA3 106 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 TM9SF1O15321 606 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 GPRIN2O60269 458 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 SMPD2O60906 423 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 MLNP12872 115 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 ADORA2BP29275 332 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 ALDH3A1P30838 453 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 RPL22P35268 128 aaKnown RBP4.8□□□□□ -1.64
NEDD4-203ENST00000502612 ADRA1AP35348 466 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 FDFT1P37268 417 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 PTGFRP43088 359 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 SLCO1A2P46721 670 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 HCAR3P49019 387 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 NAB1Q13506 487 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 DPYSL3Q14195 570 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 RAB35Q15286 201 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 UBE2V2Q15819 145 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 CDKN3Q16667 212 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 TMEM52BQ4KMG9 183 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 CST9Q5W186 159 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 PMF1Q6P1K2 205 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 C3orf62Q6ZUJ4 267 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 SERINC5Q86VE9 423 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 C12orf29Q8N999 325 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 ZBTB44Q8NCP5 570 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 SLC2A14Q8TDB8 520 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 CDKL2Q92772 493 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 FAF2Q96CS3 445 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 ZBED6CLQ96FA7 236 aaPredicted RBP4.8□□□□□ -1.64
NEDD4-203ENST00000502612 SMARCD1Q96GM5 515 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 MAGEB18Q96M61 343 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 ACBD6Q9BR61 282 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 MRPL45Q9BRJ2 306 aaKnown RBP4.8□□□□□ -1.64
NEDD4-203ENST00000502612 IQCGQ9H095 443 aaKnown RBP4.8□□□□□ -1.64
NEDD4-203ENST00000502612 DHX35Q9H5Z1 703 aaKnown RBP4.8□□□□□ -1.64
NEDD4-203ENST00000502612 TIGARQ9NQ88 270 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 FAM49BQ9NUQ9 324 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 KLRF1Q9NZS2 232 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 HMGXB4Q9UGU5 601 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 DHRS7Q9Y394 339 aa4.8□□□□□ -1.64
NEDD4-203ENST00000502612 A0A1W2PQ72 361 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TMEM120BA0PK00 339 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ERI2A8K979 691 aaKnown RBP4.79□□□□□ -1.64
NEDD4-203ENST00000502612 CYSRT1A8MQ03 144 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 NPIPA2E9PIF3 369 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 H3BTX0 84 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 SDHDO14521 159 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 CASKO14936 926 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 RHBDL1O75783 438 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ATP5HO75947 161 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 AK1P00568 194 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 CYBAP13498 195 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TPSB2P20231 275 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 MAGEA6P43360 314 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TRPC1P48995 793 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 STK19P49842 368 aaPredicted RBP4.79□□□□□ -1.64
NEDD4-203ENST00000502612 SULT1E1P49888 294 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 SERPINB9P50453 376 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 BEX3Q00994 111 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ZNF33AQ06730 810 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 DNAJC3Q13217 504 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TMED2Q15363 201 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TRIP10Q15642 601 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TPSAB1Q15661 275 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 HHATQ5VTY9 493 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 SLX4IPQ5VYV7 408 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 TTC19Q6DKK2 380 aaPredicted RBP4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ARSKQ6UWY0 536 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ZNF600Q6ZNG1 722 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 CYS1Q717R9 158 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 LHFPL4Q7Z7J7 247 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 FAM228AQ86W67 206 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 CDC20BQ86Y33 519 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 ARHGAP18Q8N392 663 aa4.79□□□□□ -1.64
NEDD4-203ENST00000502612 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms