RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SLC38A1Q9H2H9 487 aa8.2□□□□□ -1.1
FN1-227ENST00000498719 NT5DC2Q9H857 520 aa8.2□□□□□ -1.1
FN1-227ENST00000498719 UCK1Q9HA47 277 aa8.2□□□□□ -1.1
FN1-227ENST00000498719 LIN7CQ9NUP9 197 aaKnown RBP8.2□□□□□ -1.1
FN1-227ENST00000498719 ADAM29Q9UKF5 820 aa8.2□□□□□ -1.1
FN1-227ENST00000498719 TRAPPC4Q9Y296 219 aa8.2□□□□□ -1.1
FN1-227ENST00000498719 CMAHPQ9Y471 501 aa8.2□□□□□ -1.1
FN1-227ENST00000498719 SPTBP11277 2137 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 K7EQM0 130 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ARHGEF9O43307 516 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 SLC2A10O95528 541 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 LIMS3P0CW19 117 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 LIMS4P0CW20 117 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 MYL12AP19105 171 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ATP5A1P25705 553 aaKnown RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 MAT2AP31153 395 aaKnown RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 CSF2RBP32927 897 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 THBS2P35442 1172 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 CASRP41180 1078 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 GPR4P46093 362 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 WNT4P56705 351 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 FABP5Q01469 135 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 CST6Q15828 149 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 CEP78Q5JTW2 689 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ENTPD8Q5MY95 495 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ZNF385CQ66K41 422 aaPredicted RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 TYW3Q6IPR3 259 aaKnown RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 ZNF517Q6ZMY9 492 aaPredicted RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 GDPGP1Q6ZNW5 385 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ABI3BPQ7Z7G0 1075 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 TRIM69Q86WT6 500 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 UBQLNLQ8IYU4 475 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 OR4F15Q8NGB8 312 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 OR52P1PQ8NH57 321 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 BBS10Q8TAM1 723 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 TEX47Q8TBZ9 253 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 TMEM163Q8TC26 289 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 SMARCD2Q92925 531 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ARSGQ96EG1 525 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ZNF486Q96H40 463 aaPredicted RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 PGAM5Q96HS1 289 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 LRFN5Q96NI6 719 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 FAIM2Q9BWQ8 316 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 SLC6A17Q9H1V8 727 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 PLK3Q9H4B4 646 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 BCL2L10Q9HD36 194 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 THAP10Q9P2Z0 257 aaPredicted RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 APOBEC3BQ9UH17 382 aaKnown RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 DMRT1Q9Y5R6 373 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 A0A1W2PR77 199 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 HELTA6NFD8 242 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 LINC01387J3KSC0 135 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 SLC30A4O14863 429 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 NCR1O76036 304 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 KAT7O95251 611 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ECDO95905 644 aaPredicted RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 THY1P04216 161 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 LYL1P12980 280 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 GNSP15586 552 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 DNASE1P24855 282 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 MTNR1AP48039 350 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 CCR4P51679 360 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 SSTP61278 116 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 KRR1Q13601 381 aaKnown RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 PCOLCEQ15113 449 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ZIC1Q15915 447 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ATAD3CQ5T2N8 411 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 SLC27A4Q6P1M0 643 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ZNF730Q6ZMV8 503 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 TMEM182Q6ZP80 229 aaPredicted RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 NUP43Q8NFH3 380 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 OR2L3Q8NG85 312 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 RFKQ969G6 155 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 MMABQ96EY8 250 aaPredicted RBP8.19□□□□□ -1.1
FN1-227ENST00000498719 KLHDC7BQ96G42 594 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 DIRAS2Q96HU8 199 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 CES1P1Q9UKY3 287 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 ACSL5Q9ULC5 683 aa8.19□□□□□ -1.1
FN1-227ENST00000498719 CENPVL1A0A0U1RR11 272 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 IQCMA0A1B0GVH7 501 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 FABP12A6NFH5 140 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 SELENOFO60613 162 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 SAP30O75446 220 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 EML2O95834 649 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 OPN1LWP04000 364 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 CEACAM5P06731 702 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 CSF3P09919 207 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 NR2F6P10588 404 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 ACP2P11117 423 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 F3P13726 295 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 PKLRP30613 574 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 TRIM23P36406 574 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 PDX1P52945 283 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 BNC1Q01954 994 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 CD69Q07108 199 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 PDGFRLQ15198 375 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 GLYR1Q49A26 553 aaPredicted RBP8.18□□□□□ -1.1
FN1-227ENST00000498719 RNLSQ5VYX0 342 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 SLC48A1Q6P1K1 146 aa8.18□□□□□ -1.1
FN1-227ENST00000498719 PM20D2Q8IYS1 436 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms