RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TRIM36Q9NQ86 728 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 GDF3Q9NR23 364 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 PLEKHJ1Q9NW61 149 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SIDT1Q9NXL6 827 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 CNOT2Q9NZN8 540 aaKnown RBP2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 OR6C3Q9NZP0 311 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 IL17BQ9UHF5 180 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 SERTAD3Q9UJW9 196 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 FBXL4Q9UKA2 621 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 PITPNC1Q9UKF7 332 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 U3KQ87 197 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ADAMTS7Q9UKP4 1686 aa2.84□□□□□ -1.96
SNRNP48-202ENST00000496946 ARAP3Q8WWN8 1544 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CNTNAP1P78357 1384 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ATRNL1Q5VV63 1379 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CROCC2H7BZ55 1655 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NPIPA5A0A0B4J1W7 369 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR6C68A6NDL8 312 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A7PA6NKC0 464 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A22PA8MWA6 464 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A12PA8MX19 464 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A23PA8MXZ1 464 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR11H12B2RN74 326 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SEC14L6B5MCN3 397 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NPIPA5E9PKD4 350 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NPIPA3F8WFD2 350 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 H0YGN5 161 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 H3BNH8 94 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 AZIN1O14977 448 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC16A4O15374 487 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 GYG2O15488 501 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RGS14O43566 566 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CSO75390 466 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RAD51DO75771 328 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 UPK1BO75841 260 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PAPSS2O95340 614 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR8U9P0C7N5 309 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ADORA3P0DMS8 318 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MMP9P14780 707 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SSTR5P35346 364 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PPOXP50336 477 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RORCP51449 518 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CLDN18P56856 261 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4D2P58180 307 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SEC61GP60059 68 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RPS20P60866 119 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PPP3R1P63098 170 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HSF1Q00613 529 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 IFITM3Q01628 133 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC18A2Q05940 514 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SKP2Q13309 424 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ABRAXAS2Q15018 415 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RBMS2Q15434 407 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PGGHGQ32M88 737 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 DPCR1Q3MIW9 517 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 GCSAMLQ5JQS6 135 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 C6orf136Q5SQH8 315 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 DHRS7BQ6IAN0 325 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC8B1Q6J4K2 584 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ANKRD54Q6NXT1 300 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RNASEKQ6P5S7 137 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PODNL1Q6PEZ8 512 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HAGHLQ6PII5 290 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RHBDF2Q6PJF5 856 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ZDHHC24Q6UX98 284 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ACOT7LQ6ZUV0 252 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PAQR9Q6ZVX9 377 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 G2E3Q7L622 706 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 LRRC52Q8N7C0 313 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RNF148Q8N7C7 305 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 DNAJC5GQ8N7S2 189 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR11H1Q8NG94 326 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR5D13Q8NGL4 314 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4Q3Q8NH05 313 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR11H2Q8NH07 326 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR5K1Q8NHB7 308 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MARCH1Q8TCQ1 289 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC2A12Q8TD20 617 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB2BQ8WUD1 216 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAR1Q8WVX9 515 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NEU4Q8WWR8 484 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ASB17Q8WXJ9 295 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ACOT12Q8WYK0 555 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NRGNQ92686 78 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HOXB13Q92826 284 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 BIRC7Q96CA5 298 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF503Q96F45 646 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PGAM5Q96HS1 289 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 Q96MT0 163 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 GPR137Q96N19 417 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 APOL4Q9BPW4 351 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 URM1Q9BTM9 101 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SPATA5L1Q9BVQ7 753 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SCNM1Q9BWG6 230 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SUCNR1Q9BXA5 334 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TBL1XR1Q9BZK7 514 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NKX6-2Q9C056 277 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 GPR88Q9GZN0 384 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MS4A7Q9GZW8 240 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 C1orf198Q9H425 327 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms