RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 FRRS1Q6ZNA5 592 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 OLIG3Q7RTU3 272 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 C16orf62Q7Z3J2 963 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 MYPOPQ86VE0 399 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-209ENST00000495677 RIBC1Q8N443 379 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-209ENST00000495677 DUSP26Q9BV47 211 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 TMPRSS13Q9BYE2 586 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 NTN4Q9HB63 628 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 REV1Q9UBZ9 1251 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 LOC105371242A0A075B767 164 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 A0A096LPE4 126 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 A0A1W2PPZ6 126 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 J3QLI3 93 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 M0R233 179 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 WNT9BO14905 357 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 UPK3AO75631 287 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 HPXP02790 462 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 CELA3BP08861 270 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 CPA3P15088 417 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 NR4A1P22736 598 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 GLRXP35754 106 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 CCT5P48643 541 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 UBA52P62987 128 aaKnown RBP11.55□□□□□ -0.56
COL1A1-209ENST00000495677 TUBA1BP68363 451 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 TUBA4AP68366 448 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 ATAD3BQ5T9A4 648 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 ACSM5Q6NUN0 579 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 TUBA1AQ71U36 451 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 NANPQ8TBE9 248 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 XAGE5Q8WWM1 108 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 ROPN1LQ96C74 230 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 SLC35G5Q96KT7 338 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 ALKBH3Q96Q83 286 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-209ENST00000495677 MRPL37Q9BZE1 423 aaKnown RBP11.55□□□□□ -0.56
COL1A1-209ENST00000495677 OR51I1Q9H343 314 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 TPK1Q9H3S4 243 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 LPAR2Q9HBW0 351 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 NOX3Q9HBY0 568 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 ZNF275Q9NSD4 429 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-209ENST00000495677 DDX28Q9NUL7 540 aaKnown RBP11.55□□□□□ -0.56
COL1A1-209ENST00000495677 TREM2Q9NZC2 230 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 VWFP04275 2813 aa11.55□□□□□ -0.56
COL1A1-209ENST00000495677 A0A1W2PPM1 405 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 CLDN24A6NM45 220 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 POM121CA8CG34 1229 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 RNASET2O00584 256 aaKnown RBP11.54□□□□□ -0.56
COL1A1-209ENST00000495677 PIP5K1BO14986 540 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 ZNF432O94892 652 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 OR12D1P0DN82 309 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 CRHR1P34998 444 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 ROR2Q01974 943 aaKnown RBP11.54□□□□□ -0.56
COL1A1-209ENST00000495677 CKAP4Q07065 602 aaKnown RBP11.54□□□□□ -0.56
COL1A1-209ENST00000495677 FUT5Q11128 374 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 SNTB2Q13425 540 aaKnown RBP11.54□□□□□ -0.56
COL1A1-209ENST00000495677 OR7A5Q15622 319 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 MSMPQ1L6U9 139 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 MMEL1Q495T6 779 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 ATP6AP1LQ52LC2 224 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 XKR7Q5GH72 579 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 C6orf136Q5SQH8 315 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 NIPAL3Q6P499 406 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 GPAT4Q86UL3 456 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 EPHX4Q8IUS5 362 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 TWIST2Q8WVJ9 160 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 CNOT9Q92600 299 aaKnown RBP11.54□□□□□ -0.56
COL1A1-209ENST00000495677 ZNF416Q9BWM5 594 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 GATA5Q9BWX5 397 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-209ENST00000495677 ZNF385DQ9H6B1 395 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 PSMC3IPQ9P2W1 217 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-209ENST00000495677 RASD1Q9Y272 281 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 ZNF281Q9Y2X9 895 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 FIS1Q9Y3D6 152 aa11.54□□□□□ -0.56
COL1A1-209ENST00000495677 DOCK11Q5JSL3 2073 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 A0A0G2JMP0 313 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 A0A0X1KG70 313 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 RNF103-CHMP3A0A140T963 221 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 AP3D1O14617 1153 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 PEX11AO75192 247 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 RP2O75695 350 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 ARAFP10398 606 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 ZNF35P13682 527 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 GATA3P23771 443 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 SOAT1P35610 550 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 CLDN8P56748 225 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 EPS8Q12929 822 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 IL23RQ5VWK5 629 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 TRMT10CQ7L0Y3 403 aaKnown RBP11.53□□□□□ -0.56
COL1A1-209ENST00000495677 DDIASQ8IXT1 998 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 KRTCAP2Q8N6L1 136 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 SYT14Q8NB59 555 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 OR4M2Q8NGB6 313 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 IFT81Q8WYA0 676 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 YIPF5Q969M3 257 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 ZNF75AQ96N20 296 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 SLC6A7Q99884 636 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 TAPBPLQ9BX59 468 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 SLITRK2Q9H156 845 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 CRLF2Q9HC73 371 aa11.53□□□□□ -0.56
COL1A1-209ENST00000495677 B3GNT2Q9NY97 397 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms