RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF418Q8TF45 676 aaPredicted RBP12.35□□□□□ -0.43
VARS-228ENST00000495010 CKAP2Q8WWK9 683 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 GCDHQ92947 438 aaPredicted RBP12.35□□□□□ -0.43
VARS-228ENST00000495010 NEURL3Q96EH8 262 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 TRNT1Q96Q11 434 aaKnown RBP12.35□□□□□ -0.43
VARS-228ENST00000495010 DOK1Q99704 481 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 SLC35A5Q9BS91 424 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 ASIC5Q9NY37 505 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 TLDC2A0PJX2 215 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 AGAP5A6NIR3 686 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 IGLV1-44P01699 117 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 DBIP07108 87 aaKnown RBP12.34□□□□□ -0.43
VARS-228ENST00000495010 CBR1P16152 277 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 ROR2Q01974 943 aaKnown RBP12.34□□□□□ -0.43
VARS-228ENST00000495010 PLAURQ03405 335 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 HGFACQ04756 655 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 EPS8Q12929 822 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 NPRL3Q12980 569 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 RIN1Q13671 783 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 SYPL1Q16563 259 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 SMU1Q2TAY7 513 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 FAM174BQ3ZCQ3 159 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 PRAMEF8Q5VWM4 474 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 PRAMEF7Q5VXH5 474 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 CREB3L2Q70SY1 520 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 CADM2Q8N3J6 435 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 FAM169BQ8N8A8 192 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 PPP1R36Q96LQ0 422 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 MTHFD2LQ9H903 347 aaPredicted RBP12.34□□□□□ -0.43
VARS-228ENST00000495010 SEC61A2Q9H9S3 476 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 MKS1Q9NXB0 559 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 SLC17A7Q9P2U7 560 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 GRIP1Q9Y3R0 1128 aa12.34□□□□□ -0.43
VARS-228ENST00000495010 A8MVM7 634 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 LYNX1G3V0Z9 82 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 HMGN4O00479 90 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 UPK3AO75631 287 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 IGKV3-15P01624 115 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 CHRM4P08173 479 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 LYNX1P0DP58 116 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 NR2F1P10589 423 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 GTF2E2P29084 291 aaKnown RBP12.33□□□□□ -0.44
VARS-228ENST00000495010 ARR3P36575 388 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 CAPZA2P47755 286 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 BNIP2Q12982 314 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 DAG1Q14118 895 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 MRPL2Q5T653 305 aaKnown RBP12.33□□□□□ -0.44
VARS-228ENST00000495010 DEF8Q6ZN54 512 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 LRRC74BQ6ZQY2 392 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 LSRQ86X29 649 aaPredicted RBP12.33□□□□□ -0.44
VARS-228ENST00000495010 RNF130Q86XS8 419 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 PEX5LQ8IYB4 626 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 CDK20Q8IZL9 346 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 TRIML2Q8N7C3 387 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 ANKFN1Q8N957 763 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 IL17RDQ8NFM7 739 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 LINC00470Q9BZP3 86 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 TPK1Q9H3S4 243 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 CRLF2Q9HC73 371 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 CMAHPQ9Y471 501 aa12.33□□□□□ -0.44
VARS-228ENST00000495010 PRAMEF27A3QJZ7 478 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 TRIM77I1YAP6 450 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 SLC43A1O75387 559 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 SPAG7O75391 227 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 CELA3BP08861 270 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 NCF2P19878 526 aaPredicted RBP12.32□□□□□ -0.44
VARS-228ENST00000495010 GPR6P46095 362 aaPredicted RBP12.32□□□□□ -0.44
VARS-228ENST00000495010 CLNS1AP54105 237 aaKnown RBP12.32□□□□□ -0.44
VARS-228ENST00000495010 TXNL4AP83876 142 aaKnown RBP12.32□□□□□ -0.44
VARS-228ENST00000495010 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
VARS-228ENST00000495010 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
VARS-228ENST00000495010 PDCD2Q16342 344 aaPredicted RBP12.32□□□□□ -0.44
VARS-228ENST00000495010 DPY19L1Q2PZI1 675 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 C1orf140Q5VVS0 124 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 WBP2NLQ6ICG8 309 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 KRT80Q6KB66 452 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 LINGO2Q7L985 606 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 GPR137CQ8N3F9 429 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 SEMA6DQ8NFY4 1073 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 TMEM186Q96B77 213 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 ZIM3Q96PE6 472 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 SLC38A1Q9H2H9 487 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 NARFLQ9H6Q4 476 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 LPAR2Q9HBW0 351 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 HIF1ANQ9NWT6 349 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 PRDM4Q9UKN5 801 aa12.32□□□□□ -0.44
VARS-228ENST00000495010 A0A096LPI6 279 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 IGHV2OR16-5A0A0B4J2B6 119 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 TMEM129A0AVI4 362 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 FRS3O43559 492 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 RGS9O75916 674 aaPredicted RBP12.31□□□□□ -0.44
VARS-228ENST00000495010 AHSA1O95433 338 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 NUDT17P0C025 328 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 TFPTP0C1Z6 253 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 GKN3PP0CG01 181 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 ZNF43P17038 809 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 S100A3P33764 101 aa12.31□□□□□ -0.44
VARS-228ENST00000495010 CLDN17P56750 224 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms